RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 THAP3Q8WTV1 239 aaPredicted RBP6.16□□□□□ -1.42
USP47-211ENST00000531513 CDIP1Q9H305 208 aa6.16□□□□□ -1.42
USP47-211ENST00000531513 SMOC1Q9H4F8 434 aa6.16□□□□□ -1.42
USP47-211ENST00000531513 ZDHHC9Q9Y397 364 aa6.16□□□□□ -1.42
USP47-211ENST00000531513 TAF7LQ5H9L4 462 aa6.15□□□□□ -1.42
USP47-211ENST00000531513 SLC35F1Q5T1Q4 408 aa6.15□□□□□ -1.42
USP47-211ENST00000531513 USP51Q70EK9 711 aa6.15□□□□□ -1.42
USP47-211ENST00000531513 ZNF669Q96BR6 464 aaPredicted RBP6.15□□□□□ -1.42
USP47-211ENST00000531513 MENTQ9BUN1 341 aa6.15□□□□□ -1.42
USP47-211ENST00000531513 HSPBP1Q9NZL4 362 aa6.15□□□□□ -1.42
USP47-211ENST00000531513 ASH2LQ9UBL3 628 aa6.15□□□□□ -1.42
USP47-211ENST00000531513 ADAM29Q9UKF5 820 aa6.15□□□□□ -1.42
USP47-211ENST00000531513 DIAPH1O60610 1272 aaKnown RBP6.14□□□□□ -1.43
USP47-211ENST00000531513 ZNF623O75123 536 aa6.14□□□□□ -1.43
USP47-211ENST00000531513 KLHL18O94889 574 aa6.14□□□□□ -1.43
USP47-211ENST00000531513 CNOT4O95628 575 aaKnown RBP6.14□□□□□ -1.43
USP47-211ENST00000531513 CYP4F22Q6NT55 531 aa6.14□□□□□ -1.43
USP47-211ENST00000531513 RALYLQ86SE5 291 aaKnown RBP6.14□□□□□ -1.43
USP47-211ENST00000531513 DTX3Q8N9I9 347 aa6.14□□□□□ -1.43
USP47-211ENST00000531513 ST13P5Q8NFI4 369 aaPredicted RBP6.14□□□□□ -1.43
USP47-211ENST00000531513 TTLL11Q8NHH1 800 aa6.14□□□□□ -1.43
USP47-211ENST00000531513 FEZ1Q99689 392 aa6.14□□□□□ -1.43
USP47-211ENST00000531513 PCED1AQ9H1Q7 454 aa6.14□□□□□ -1.43
USP47-211ENST00000531513 NPFFR2Q9Y5X5 522 aa6.14□□□□□ -1.43
USP47-211ENST00000531513 KDM2BQ8NHM5 1336 aa6.14□□□□□ -1.43
USP47-211ENST00000531513 MAFKO60675 156 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 GRIA2P42262 883 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 MASP1P48740 699 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 AMPD3Q01432 767 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 GRIN1Q05586 938 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 KLF10Q13118 480 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 VASNQ6EMK4 673 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 NOL8Q76FK4 1167 aaKnown RBP6.13□□□□□ -1.43
USP47-211ENST00000531513 SPATC1Q76KD6 591 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 RPUSD2Q8IZ73 545 aaKnown RBP6.13□□□□□ -1.43
USP47-211ENST00000531513 PIP4K2CQ8TBX8 421 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 Q8TCH9 128 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 CHMP4AQ9BY43 222 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 DLL4Q9NR61 685 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 PPARGC1AQ9UBK2 798 aaKnown RBP6.13□□□□□ -1.43
USP47-211ENST00000531513 PFDN2Q9UHV9 154 aa6.13□□□□□ -1.43
USP47-211ENST00000531513 A0A1W2PQU0 124 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 KRIT1O00522 736 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 SLC27A2O14975 620 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 PPP2R2AP63151 447 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 SSRP1Q08945 709 aaKnown RBP6.12□□□□□ -1.43
USP47-211ENST00000531513 TCEA2Q15560 299 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 TKFCQ3LXA3 575 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 SYNPOQ8N3V7 929 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 JAM3Q9BX67 310 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 SEMA4AQ9H3S1 761 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 SLITRK6Q9H5Y7 841 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 SLC6A20Q9NP91 592 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 HS3ST3A1Q9Y663 406 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 PTCH2Q9Y6C5 1203 aa6.12□□□□□ -1.43
USP47-211ENST00000531513 MSCO60682 206 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 KNG1P01042 644 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 CSF2RBP32927 897 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 MAP4K2Q12851 820 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 SMAD2Q15796 467 aaKnown RBP6.11□□□□□ -1.43
USP47-211ENST00000531513 CRB2Q5IJ48 1285 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 Q6ZUG5 572 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 GPR155Q7Z3F1 870 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 TRIM48Q8IWZ4 208 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 CLEC4DQ8WXI8 215 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 GNRHR2Q96P88 292 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 KLHL42Q9P2K6 505 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 ZFP69BQ9UJL9 534 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 ING1Q9UK53 422 aaPredicted RBP6.11□□□□□ -1.43
USP47-211ENST00000531513 TESMINQ9Y4I5 508 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 SLC4A7Q9Y6M7 1214 aa6.11□□□□□ -1.43
USP47-211ENST00000531513 AGRPO00253 132 aa6.1□□□□□ -1.43
USP47-211ENST00000531513 FOXS1O43638 330 aa6.1□□□□□ -1.43
USP47-211ENST00000531513 ASMTLO95671 621 aa6.1□□□□□ -1.43
USP47-211ENST00000531513 RBM12BQ8IXT5 1001 aaKnown RBP6.1□□□□□ -1.43
USP47-211ENST00000531513 ZSWIM2Q8NEG5 633 aa6.1□□□□□ -1.43
USP47-211ENST00000531513 SGSM3Q96HU1 749 aa6.1□□□□□ -1.43
USP47-211ENST00000531513 SEC61A2Q9H9S3 476 aa6.1□□□□□ -1.43
USP47-211ENST00000531513 GPR27Q9NS67 375 aa6.1□□□□□ -1.43
USP47-211ENST00000531513 DDX56Q9NY93 547 aaKnown RBP6.1□□□□□ -1.43
USP47-211ENST00000531513 FBXO21O94952 628 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 LTFP02788 710 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 CHGBP05060 677 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 VIL1P09327 827 aaKnown RBP6.09□□□□□ -1.43
USP47-211ENST00000531513 GLRBP48167 497 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 TUSC3Q13454 348 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 LONRF2Q1L5Z9 754 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 SKIDA1Q1XH10 827 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 PLEKHG6Q3KR16 790 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 DALRD3Q5D0E6 543 aaKnown RBP6.09□□□□□ -1.43
USP47-211ENST00000531513 TCTN3Q6NUS6 607 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 STAG1Q8WVM7 1258 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 KCTD13Q8WZ19 329 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 AJUBAQ96IF1 538 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 LRRC37BQ96QE4 947 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 LMF1Q96S06 567 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 IER2Q9BTL4 223 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 PHF20Q9BVI0 1012 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 SPATA9Q9BWV2 254 aa6.09□□□□□ -1.43
USP47-211ENST00000531513 DLX3O60479 287 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms