RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.44■□□□□ 0.86
PTPN11-204ENST00000531326 ATP9AO75110 1047 aa20.44■□□□□ 0.86
PTPN11-204ENST00000531326 GNAT1P11488 350 aa20.44■□□□□ 0.86
PTPN11-204ENST00000531326 XRRA1Q6P2D8 792 aa20.44■□□□□ 0.86
PTPN11-204ENST00000531326 KHSRPQ92945 711 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTPN11-204ENST00000531326 CUL5Q93034 780 aa20.44■□□□□ 0.86
PTPN11-204ENST00000531326 SLKQ9H2G2 1235 aaPredicted RBP20.44■□□□□ 0.86
PTPN11-204ENST00000531326 EPHX3Q9H6B9 360 aa20.44■□□□□ 0.86
PTPN11-204ENST00000531326 UBE2ZQ9H832 354 aaPredicted RBP20.44■□□□□ 0.86
PTPN11-204ENST00000531326 ZNF215Q9UL58 517 aaPredicted RBP20.44■□□□□ 0.86
PTPN11-204ENST00000531326 KAT6AQ92794 2004 aa20.44■□□□□ 0.86
PTPN11-204ENST00000531326 COL4A6Q14031 1691 aa20.43■□□□□ 0.86
PTPN11-204ENST00000531326 hCG_1642624A0A1W2PR95 340 aa20.43■□□□□ 0.86
PTPN11-204ENST00000531326 CD2BP2O95400 341 aaKnown RBP20.43■□□□□ 0.86
PTPN11-204ENST00000531326 ARHGAP4P98171 946 aa20.43■□□□□ 0.86
PTPN11-204ENST00000531326 FAM26DQ5JW98 314 aa20.43■□□□□ 0.86
PTPN11-204ENST00000531326 C1QTNF1Q9BXJ1 281 aa20.43■□□□□ 0.86
PTPN11-204ENST00000531326 SEC63Q9UGP8 760 aaKnown RBP20.43■□□□□ 0.86
PTPN11-204ENST00000531326 LIMCH1Q9UPQ0 1083 aa20.43■□□□□ 0.86
PTPN11-204ENST00000531326 NLRC5Q86WI3 1866 aa20.43■□□□□ 0.86
PTPN11-204ENST00000531326 ST18O60284 1047 aa20.42■□□□□ 0.86
PTPN11-204ENST00000531326 UPP2O95045 317 aa20.42■□□□□ 0.86
PTPN11-204ENST00000531326 KCNA2P16389 499 aa20.42■□□□□ 0.86
PTPN11-204ENST00000531326 IFNAR1P17181 557 aa20.42■□□□□ 0.86
PTPN11-204ENST00000531326 ITGB5P18084 799 aa20.42■□□□□ 0.86
PTPN11-204ENST00000531326 TCF7P36402 384 aaPredicted RBP20.42■□□□□ 0.86
PTPN11-204ENST00000531326 ST3GAL1Q11201 340 aa20.42■□□□□ 0.86
PTPN11-204ENST00000531326 EPC2Q52LR7 807 aa20.42■□□□□ 0.86
PTPN11-204ENST00000531326 RUFY4Q6ZNE9 571 aa20.42■□□□□ 0.86
PTPN11-204ENST00000531326 NLRX1Q86UT6 975 aa20.42■□□□□ 0.86
PTPN11-204ENST00000531326 NECAB1Q8N987 351 aa20.42■□□□□ 0.86
PTPN11-204ENST00000531326 YME1L1Q96TA2 773 aa20.42■□□□□ 0.86
PTPN11-204ENST00000531326 CD320Q9NPF0 282 aa20.42■□□□□ 0.86
PTPN11-204ENST00000531326 CHRNA1P02708 482 aa20.41■□□□□ 0.86
PTPN11-204ENST00000531326 PHKBQ93100 1093 aa20.41■□□□□ 0.86
PTPN11-204ENST00000531326 GTF3C6Q969F1 213 aa20.41■□□□□ 0.86
PTPN11-204ENST00000531326 GPRASP2Q96D09 838 aa20.41■□□□□ 0.86
PTPN11-204ENST00000531326 MRPL38Q96DV4 380 aaKnown RBP20.41■□□□□ 0.86
PTPN11-204ENST00000531326 IFIH1Q9BYX4 1025 aaKnown RBP20.41■□□□□ 0.86
PTPN11-204ENST00000531326 PSTPIP2Q9H939 334 aa20.41■□□□□ 0.86
PTPN11-204ENST00000531326 V9GY48 417 aaPredicted RBP20.41■□□□□ 0.86
PTPN11-204ENST00000531326 NRCAMQ92823 1304 aa20.41■□□□□ 0.86
PTPN11-204ENST00000531326 GSTTP1A0A1W2PQM5 241 aa20.4■□□□□ 0.86
PTPN11-204ENST00000531326 PPFIA3O75145 1194 aa20.4■□□□□ 0.86
PTPN11-204ENST00000531326 UBE2SQ16763 222 aa20.4■□□□□ 0.86
PTPN11-204ENST00000531326 GIMAP8Q8ND71 665 aaPredicted RBP20.4■□□□□ 0.86
PTPN11-204ENST00000531326 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.4■□□□□ 0.86
PTPN11-204ENST00000531326 APBB2Q92870 758 aa20.4■□□□□ 0.86
PTPN11-204ENST00000531326 SAMD11Q96NU1 681 aa20.4■□□□□ 0.86
PTPN11-204ENST00000531326 UBIAD1Q9Y5Z9 338 aa20.4■□□□□ 0.86
PTPN11-204ENST00000531326 RALGAPA2Q2PPJ7 1873 aa20.39■□□□□ 0.86
PTPN11-204ENST00000531326 H3BNC9 293 aa20.39■□□□□ 0.85
PTPN11-204ENST00000531326 PRPF3O43395 683 aaKnown RBP20.39■□□□□ 0.85
PTPN11-204ENST00000531326 CTDNEP1O95476 244 aa20.39■□□□□ 0.85
PTPN11-204ENST00000531326 KCNA5P22460 613 aa20.39■□□□□ 0.85
PTPN11-204ENST00000531326 MGAT3Q09327 533 aa20.39■□□□□ 0.85
PTPN11-204ENST00000531326 LEXMQ3ZCV2 418 aa20.39■□□□□ 0.85
PTPN11-204ENST00000531326 RPAINQ86UA6 219 aa20.39■□□□□ 0.85
PTPN11-204ENST00000531326 TMEM192Q8IY95 271 aa20.39■□□□□ 0.85
PTPN11-204ENST00000531326 SEPT1Q8WYJ6 367 aa20.39■□□□□ 0.85
PTPN11-204ENST00000531326 EHMT1Q9H9B1 1298 aa20.39■□□□□ 0.85
PTPN11-204ENST00000531326 ATG2AQ2TAZ0 1938 aa20.38■□□□□ 0.85
PTPN11-204ENST00000531326 CPLX1O14810 134 aa20.38■□□□□ 0.85
PTPN11-204ENST00000531326 GHRP10912 638 aa20.38■□□□□ 0.85
PTPN11-204ENST00000531326 MARK3P27448 753 aa20.38■□□□□ 0.85
PTPN11-204ENST00000531326 GPM6BQ13491 265 aa20.38■□□□□ 0.85
PTPN11-204ENST00000531326 PKN1Q16512 942 aa20.38■□□□□ 0.85
PTPN11-204ENST00000531326 MARCH8Q5T0T0 291 aa20.38■□□□□ 0.85
PTPN11-204ENST00000531326 CDHR1Q96JP9 859 aa20.38■□□□□ 0.85
PTPN11-204ENST00000531326 ZSCAN31Q96LW9 406 aaPredicted RBP20.38■□□□□ 0.85
PTPN11-204ENST00000531326 LRFN3Q9BTN0 628 aa20.38■□□□□ 0.85
PTPN11-204ENST00000531326 SLC26A6Q9BXS9 759 aa20.38■□□□□ 0.85
PTPN11-204ENST00000531326 RNF26Q9BY78 433 aaPredicted RBP20.38■□□□□ 0.85
PTPN11-204ENST00000531326 PKD2L1Q9P0L9 805 aa20.38■□□□□ 0.85
PTPN11-204ENST00000531326 MBLAC1A4D2B0 266 aaPredicted RBP20.37■□□□□ 0.85
PTPN11-204ENST00000531326 LINC00271P0C7V0 271 aa20.37■□□□□ 0.85
PTPN11-204ENST00000531326 PPFIA1Q13136 1202 aa20.37■□□□□ 0.85
PTPN11-204ENST00000531326 MTMR1Q13613 665 aa20.37■□□□□ 0.85
PTPN11-204ENST00000531326 LPIN1Q14693 890 aa20.37■□□□□ 0.85
PTPN11-204ENST00000531326 GRIK4Q16099 956 aa20.37■□□□□ 0.85
PTPN11-204ENST00000531326 PFKFB3Q16875 520 aaPredicted RBP20.37■□□□□ 0.85
PTPN11-204ENST00000531326 WWC2Q6AWC2 1192 aa20.37■□□□□ 0.85
PTPN11-204ENST00000531326 TAF2Q6P1X5 1199 aa20.37■□□□□ 0.85
PTPN11-204ENST00000531326 C11orf16Q9NQ32 467 aa20.37■□□□□ 0.85
PTPN11-204ENST00000531326 SH2B1Q9NRF2 756 aaPredicted RBP20.37■□□□□ 0.85
PTPN11-204ENST00000531326 ERAP1Q9NZ08 941 aa20.37■□□□□ 0.85
PTPN11-204ENST00000531326 PCDHA6Q9UN73 950 aa20.37■□□□□ 0.85
PTPN11-204ENST00000531326 PCDHA8Q9Y5H6 950 aa20.37■□□□□ 0.85
PTPN11-204ENST00000531326 DTNBO60941 627 aa20.36■□□□□ 0.85
PTPN11-204ENST00000531326 IL9P15248 144 aa20.36■□□□□ 0.85
PTPN11-204ENST00000531326 PTPROQ16827 1216 aa20.36■□□□□ 0.85
PTPN11-204ENST00000531326 TYW1BQ6NUM6 668 aa20.36■□□□□ 0.85
PTPN11-204ENST00000531326 CPLX2Q6PUV4 134 aaKnown RBP20.36■□□□□ 0.85
PTPN11-204ENST00000531326 HEATR3Q7Z4Q2 680 aa20.36■□□□□ 0.85
PTPN11-204ENST00000531326 FAM178BQ8IXR5 827 aa20.36■□□□□ 0.85
PTPN11-204ENST00000531326 BANK1Q8NDB2 785 aa20.36■□□□□ 0.85
PTPN11-204ENST00000531326 DNAJB3Q8WWF6 145 aa20.36■□□□□ 0.85
PTPN11-204ENST00000531326 ZBTB10Q96DT7 871 aa20.36■□□□□ 0.85
PTPN11-204ENST00000531326 PCYT2Q99447 389 aa20.36■□□□□ 0.85
PTPN11-204ENST00000531326 RC3H2Q9HBD1 1191 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms