RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 LMBR1Q8WVP7 490 aa13.42□□□□□ -0.26
LTBP3-219ENST00000530990 HAS1Q92839 578 aa13.42□□□□□ -0.26
LTBP3-219ENST00000530990 WNT8BQ93098 351 aa13.42□□□□□ -0.26
LTBP3-219ENST00000530990 WNT8AQ9H1J5 351 aa13.42□□□□□ -0.26
LTBP3-219ENST00000530990 SAMM50Q9Y512 469 aa13.42□□□□□ -0.26
LTBP3-219ENST00000530990 MYH15Q9Y2K3 1946 aa13.42□□□□□ -0.26
LTBP3-219ENST00000530990 IGSF9BQ9UPX0 1349 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 ARID2Q68CP9 1835 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 WDR64B1ANS9 1081 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 TBX3O15119 743 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 NEMFO60524 1076 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 ATP2B1P20020 1258 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 U2AF2P26368 475 aaKnown RBP eCLIP13.41□□□□□ -0.26
LTBP3-219ENST00000530990 FXR1P51114 621 aaKnown RBP eCLIP13.41□□□□□ -0.26
LTBP3-219ENST00000530990 PLCB4Q15147 1175 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 FAM160B1Q5W0V3 765 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 SWSAP1Q6NVH7 229 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 B3GNT9Q6UX72 402 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 PLPPR4Q7Z2D5 763 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 HSCBQ8IWL3 235 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 FAM20AQ96MK3 541 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 UBE2OQ9C0C9 1292 aaKnown RBP13.41□□□□□ -0.26
LTBP3-219ENST00000530990 ZNF302Q9NR11 478 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 DISC1Q9NRI5 854 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 SETD4Q9NVD3 440 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 VAV3Q9UKW4 847 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 PCDHA10Q9Y5I2 948 aa13.41□□□□□ -0.26
LTBP3-219ENST00000530990 H3BQV1 296 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 TREHO43280 583 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 PSAPP07602 524 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 CSF2RAP15509 400 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 SFNP31947 248 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 MCM7P33993 719 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 BMP8BP34820 402 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 JAK3P52333 1124 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 EPHB4P54760 987 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 CCL23P55773 120 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 ADAM17P78536 824 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 FPGSQ05932 587 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 PPFIA1Q13136 1202 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 PTK7Q13308 1070 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 GRIK4Q16099 956 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 CALCRLQ16602 461 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 UGCGQ16739 394 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 MCTP1Q6DN14 999 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 MFSD5Q6N075 450 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 PDXDC2PQ6P474 469 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 MIER3Q7Z3K6 550 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 SERINC5Q86VE9 423 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 ATP6V0A1Q93050 837 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 SCLYQ96I15 445 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 GABBR1Q9UBS5 961 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 TRPC6Q9Y210 931 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 LOXHD1Q8IVV2 1947 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 EVPLQ92817 2033 aa13.4□□□□□ -0.26
LTBP3-219ENST00000530990 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 TET1Q8NFU7 2136 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 POTEB3A0JP26 581 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 EML1O00423 815 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 MARCH6O60337 910 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 ATP4AP20648 1035 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 SLC26A2P50443 739 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 IGBP1P78318 339 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 RBL2Q08999 1139 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 PPP2R5CQ13362 524 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 BFSP2Q13515 415 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 NBR1Q14596 966 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 TRIM71Q2Q1W2 868 aaKnown RBP13.39□□□□□ -0.27
LTBP3-219ENST00000530990 TTC38Q5R3I4 469 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 LARP1BQ659C4 914 aaKnown RBP13.39□□□□□ -0.27
LTBP3-219ENST00000530990 POTEBQ6S5H4 581 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 TMEM199Q8N511 208 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 CCDC155Q8N6L0 562 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 RDM1Q8NG50 284 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 CAGE1Q8TC20 777 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 TRAPPC12Q8WVT3 735 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 ZBTB10Q96DT7 871 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 INTS4Q96HW7 963 aaKnown RBP13.39□□□□□ -0.27
LTBP3-219ENST00000530990 TMEM60Q9H2L4 133 aa13.39□□□□□ -0.27
LTBP3-219ENST00000530990 NOL7Q9UMY1 257 aaKnown RBP13.39□□□□□ -0.27
LTBP3-219ENST00000530990 MAFBQ9Y5Q3 323 aaPredicted RBP13.39□□□□□ -0.27
LTBP3-219ENST00000530990 RANBP2P49792 3224 aaKnown RBP13.39□□□□□ -0.27
LTBP3-219ENST00000530990 RBAK-RBAKDNI3L0D1 243 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 ZNF862O60290 1169 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 GNAT1P11488 350 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 CKBP12277 381 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 INSRRP14616 1297 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 PRKCEQ02156 737 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 SPIRE1Q08AE8 756 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 PPIGQ13427 754 aaKnown RBP eCLIP13.38□□□□□ -0.278e-9■■□□□ 13.7
LTBP3-219ENST00000530990 ZNF174Q15697 407 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 C9orf50Q5SZB4 431 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 MARCH8Q5T0T0 291 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 RUFY4Q6ZNE9 571 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 TRMT1LQ7Z2T5 733 aaKnown RBP13.38□□□□□ -0.27
LTBP3-219ENST00000530990 CKAP2LQ8IYA6 745 aa13.38□□□□□ -0.27
LTBP3-219ENST00000530990 SLFN12Q8IYM2 578 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms