RNA–Protein interactions for RNA: ENST00000530861.5

BDNF-215, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-215ENST00000530861 BLOC1S4Q9NUP1 217 aa13.81□□□□□ -0.2
BDNF-215ENST00000530861 HNRNPDLO14979 420 aaKnown RBP13.8□□□□□ -0.2
BDNF-215ENST00000530861 MSH4O15457 936 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 N4BP1O75113 896 aaKnown RBP13.8□□□□□ -0.2
BDNF-215ENST00000530861 SRGAP2CP0DJJ0 459 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 VSNL1P62760 191 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 SLFN12Q8IYM2 578 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 SUPT20HQ8NEM7 779 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 LRRC15Q8TF66 581 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 HAUS4Q9H6D7 363 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 TMOD4Q9NZQ9 345 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 PTPN22Q9Y2R2 807 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 SPOPO43791 374 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 CALUO43852 315 aaPredicted RBP13.8□□□□□ -0.2
BDNF-215ENST00000530861 BUB1BO60566 1050 aaPredicted RBP13.8□□□□□ -0.2
BDNF-215ENST00000530861 SH3BP5LQ7L8J4 393 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 UBLCP1Q8WVY7 318 aaPredicted RBP13.8□□□□□ -0.2
BDNF-215ENST00000530861 PANX2Q96RD6 677 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 DNAJC18Q9H819 358 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 TTI2Q6NXR4 508 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 PASD1Q8IV76 773 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 GLYCTKQ8IVS8 523 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 ATG4CQ96DT6 458 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 FNBP1Q96RU3 617 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 DUSP9Q99956 384 aaKnown RBP13.8□□□□□ -0.2
BDNF-215ENST00000530861 MTA3Q9BTC8 594 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 ADAM33Q9BZ11 813 aa13.8□□□□□ -0.2
BDNF-215ENST00000530861 BAZ2AQ9UIF9 1905 aaKnown RBP13.8□□□□□ -0.2
BDNF-215ENST00000530861 LAD1O00515 517 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 RHOBTB3O94955 611 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 STAT1P42224 750 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 STXBP4Q6ZWJ1 553 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 POP1Q99575 1024 aaKnown RBP13.79□□□□□ -0.2
BDNF-215ENST00000530861 NUP58Q9BVL2 599 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 FAN1Q9Y2M0 1017 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 GOLGA6L10A6NI86 522 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 H0YHG0 523 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 PALMO75781 387 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 MTMR1Q13613 665 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 SWSAP1Q6NVH7 229 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 TICAM2Q86XR7 235 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 COG1Q8WTW3 980 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 TAAR1Q96RJ0 339 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 MMTAG2Q9BU76 263 aaKnown RBP13.79□□□□□ -0.2
BDNF-215ENST00000530861 DEFB129Q9H1M3 183 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 KBTBD4Q9NVX7 518 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 LMO7Q8WWI1 1683 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 NR3C1P04150 777 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 ASNSP08243 561 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 GMPSP49915 693 aaPredicted RBP13.79□□□□□ -0.2
BDNF-215ENST00000530861 RCAN1P53805 252 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 TRIM14Q14142 442 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 HHIPL2Q6UWX4 724 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 HAS1Q92839 578 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 TNFRSF25Q93038 417 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 OTUD5Q96G74 571 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 THAP9Q9H5L6 903 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 RPAP3Q9H6T3 665 aaPredicted RBP13.79□□□□□ -0.2
BDNF-215ENST00000530861 SH2D4AQ9H788 454 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 PARVGQ9HBI0 331 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 PLCB1Q9NQ66 1216 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 STK17AQ9UEE5 414 aa13.79□□□□□ -0.2
BDNF-215ENST00000530861 YDJCA8MPS7 323 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 SNX1Q13596 522 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 RRP1BQ14684 758 aaKnown RBP13.78□□□□□ -0.2
BDNF-215ENST00000530861 RPS6KA1Q15418 735 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 TRIP13Q15645 432 aaPredicted RBP13.78□□□□□ -0.2
BDNF-215ENST00000530861 RSBN1LQ6PCB5 846 aaPredicted RBP13.78□□□□□ -0.2
BDNF-215ENST00000530861 PADI6Q6TGC4 694 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 RNF207Q6ZRF8 634 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 RIOX1Q9H6W3 641 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 RNF19AQ9NV58 838 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 LARSQ9P2J5 1176 aaKnown RBP13.78□□□□□ -0.2
BDNF-215ENST00000530861 KIF1AQ12756 1690 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 RCCD1A6NED2 376 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 NOP56O00567 594 aaKnown RBP13.78□□□□□ -0.2
BDNF-215ENST00000530861 CD58P19256 250 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 EHBP1Q8NDI1 1231 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 FAM118BQ9BPY3 351 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 EPB41L5Q9HCM4 733 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 CAPN6Q9Y6Q1 641 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 KDM3AQ9Y4C1 1321 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 BCL9LQ86UU0 1499 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 ADAMTSL3P82987 1691 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 ATMINO43313 823 aaPredicted RBP13.78□□□□□ -0.2
BDNF-215ENST00000530861 CYP11B2P19099 503 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 IRX3P78415 501 aaPredicted RBP13.78□□□□□ -0.2
BDNF-215ENST00000530861 IQCEQ6IPM2 695 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 GBP6Q6ZN66 633 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 IRF2BP1Q8IU81 584 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 GPR161Q8N6U8 529 aaKnown RBP13.78□□□□□ -0.2
BDNF-215ENST00000530861 PI4K2AQ9BTU6 479 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 NAA15Q9BXJ9 866 aaKnown RBP13.78□□□□□ -0.2
BDNF-215ENST00000530861 FHOD1Q9Y613 1164 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 KDM3BQ7LBC6 1761 aa13.78□□□□□ -0.2
BDNF-215ENST00000530861 CD19P15391 556 aa13.77□□□□□ -0.2
BDNF-215ENST00000530861 CEP55Q53EZ4 464 aa13.77□□□□□ -0.2
BDNF-215ENST00000530861 ALKBH5Q6P6C2 394 aaKnown RBP13.77□□□□□ -0.2
BDNF-215ENST00000530861 RETREG2Q8NC44 543 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms