RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SMAD4Q13485 552 aaKnown RBP10.19□□□□□ -0.78
CSDE1-213ENST00000530784 CCDC144BQ3MJ40 725 aa10.19□□□□□ -0.78
CSDE1-213ENST00000530784 CYP4F22Q6NT55 531 aa10.19□□□□□ -0.78
CSDE1-213ENST00000530784 LINC00482Q8N8I6 264 aa10.19□□□□□ -0.78
CSDE1-213ENST00000530784 ZSWIM2Q8NEG5 633 aa10.19□□□□□ -0.78
CSDE1-213ENST00000530784 TOE1Q96GM8 510 aaKnown RBP10.19□□□□□ -0.78
CSDE1-213ENST00000530784 C11orf84Q9BUA3 381 aaPredicted RBP10.19□□□□□ -0.78
CSDE1-213ENST00000530784 DTLQ9NZJ0 730 aa10.19□□□□□ -0.78
CSDE1-213ENST00000530784 PTCH2Q9Y6C5 1203 aa10.19□□□□□ -0.78
CSDE1-213ENST00000530784 MROH2AA6NES4 1674 aa10.18□□□□□ -0.78
CSDE1-213ENST00000530784 PLXNC1O60486 1568 aa10.18□□□□□ -0.78
CSDE1-213ENST00000530784 EHBP1L1Q8N3D4 1523 aa10.18□□□□□ -0.78
CSDE1-213ENST00000530784 PTPRTO14522 1441 aa10.18□□□□□ -0.78
CSDE1-213ENST00000530784 NPATQ14207 1427 aa10.18□□□□□ -0.78
CSDE1-213ENST00000530784 GUCY1A3Q02108 690 aa10.18□□□□□ -0.78
CSDE1-213ENST00000530784 PAK1Q13153 545 aa10.18□□□□□ -0.78
CSDE1-213ENST00000530784 C2orf27AQ580R0 203 aa10.18□□□□□ -0.78
CSDE1-213ENST00000530784 HABP4Q5JVS0 413 aaKnown RBP10.18□□□□□ -0.78
CSDE1-213ENST00000530784 KCNC2Q96PR1 638 aa10.18□□□□□ -0.78
CSDE1-213ENST00000530784 SPATA6Q9NWH7 488 aaPredicted RBP10.18□□□□□ -0.78
CSDE1-213ENST00000530784 PCDHA9Q9Y5H5 950 aa10.18□□□□□ -0.78
CSDE1-213ENST00000530784 A2MP01023 1474 aa10.17□□□□□ -0.78
CSDE1-213ENST00000530784 LRG1P02750 347 aa10.17□□□□□ -0.78
CSDE1-213ENST00000530784 INHBBP09529 407 aa10.17□□□□□ -0.78
CSDE1-213ENST00000530784 NKX3-2P78367 333 aa10.17□□□□□ -0.78
CSDE1-213ENST00000530784 UHMK1Q8TAS1 419 aaKnown RBP10.17□□□□□ -0.78
CSDE1-213ENST00000530784 CLEC4DQ8WXI8 215 aa10.17□□□□□ -0.78
CSDE1-213ENST00000530784 MRFAP1L1Q96HT8 127 aa10.17□□□□□ -0.78
CSDE1-213ENST00000530784 ZCCHC4Q9H5U6 513 aa10.17□□□□□ -0.78
CSDE1-213ENST00000530784 SLC52A2Q9HAB3 445 aa10.17□□□□□ -0.78
CSDE1-213ENST00000530784 PCDH18Q9HCL0 1135 aa10.17□□□□□ -0.78
CSDE1-213ENST00000530784 NGRNQ9NPE2 291 aaKnown RBP10.17□□□□□ -0.78
CSDE1-213ENST00000530784 NDOR1Q9UHB4 597 aa10.17□□□□□ -0.78
CSDE1-213ENST00000530784 TIAM1Q13009 1591 aa10.17□□□□□ -0.78
CSDE1-213ENST00000530784 NCOA1Q15788 1441 aa10.16□□□□□ -0.78
CSDE1-213ENST00000530784 SUPT6HQ7KZ85 1726 aaKnown RBP10.16□□□□□ -0.78
CSDE1-213ENST00000530784 ZMYM3Q14202 1370 aa10.16□□□□□ -0.78
CSDE1-213ENST00000530784 SH3D21A4FU49 640 aa10.16□□□□□ -0.78
CSDE1-213ENST00000530784 CRTAMO95727 393 aa10.16□□□□□ -0.78
CSDE1-213ENST00000530784 ITGA1P56199 1179 aa10.16□□□□□ -0.78
CSDE1-213ENST00000530784 GRIN1Q05586 938 aa10.16□□□□□ -0.78
CSDE1-213ENST00000530784 TEPPQ6URK8 271 aa10.16□□□□□ -0.78
CSDE1-213ENST00000530784 LIPIQ6XZB0 460 aa10.16□□□□□ -0.78
CSDE1-213ENST00000530784 PCDH19Q8TAB3 1148 aa10.16□□□□□ -0.78
CSDE1-213ENST00000530784 PARD6AQ9NPB6 346 aa10.16□□□□□ -0.78
CSDE1-213ENST00000530784 ARVCFO00192 962 aa10.15□□□□□ -0.78
CSDE1-213ENST00000530784 LTFP02788 710 aa10.15□□□□□ -0.78
CSDE1-213ENST00000530784 TUSC3Q13454 348 aa10.15□□□□□ -0.78
CSDE1-213ENST00000530784 TTLL10Q6ZVT0 673 aa10.15□□□□□ -0.78
CSDE1-213ENST00000530784 TRIM48Q8IWZ4 208 aa10.15□□□□□ -0.78
CSDE1-213ENST00000530784 SYT8Q8NBV8 401 aa10.15□□□□□ -0.78
CSDE1-213ENST00000530784 DSEQ9UL01 958 aa10.15□□□□□ -0.78
CSDE1-213ENST00000530784 CLTCQ00610 1675 aaKnown RBP10.15□□□□□ -0.79
CSDE1-213ENST00000530784 CAMSAP1Q5T5Y3 1602 aa10.15□□□□□ -0.79
CSDE1-213ENST00000530784 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.14□□□□□ -0.79
CSDE1-213ENST00000530784 WNT9AO14904 365 aa10.14□□□□□ -0.79
CSDE1-213ENST00000530784 SRGAP2CP0DJJ0 459 aa10.14□□□□□ -0.79
CSDE1-213ENST00000530784 SLURP1P55000 103 aa10.14□□□□□ -0.79
CSDE1-213ENST00000530784 KYQ8NBH2 561 aa10.14□□□□□ -0.79
CSDE1-213ENST00000530784 SLC7A14Q8TBB6 771 aa10.14□□□□□ -0.79
CSDE1-213ENST00000530784 PIF1Q9H611 641 aa10.14□□□□□ -0.79
CSDE1-213ENST00000530784 KANSL2Q9H9L4 492 aa10.14□□□□□ -0.79
CSDE1-213ENST00000530784 TELO2Q9Y4R8 837 aa10.14□□□□□ -0.79
CSDE1-213ENST00000530784 ADGBQ8N7X0 1667 aa10.14□□□□□ -0.79
CSDE1-213ENST00000530784 CEP162Q5TB80 1403 aa10.14□□□□□ -0.79
CSDE1-213ENST00000530784 MYO3AQ8NEV4 1616 aa10.14□□□□□ -0.79
CSDE1-213ENST00000530784 CCDC163A0A0D9SF12 145 aa10.13□□□□□ -0.79
CSDE1-213ENST00000530784 TCRBV5S4A2TA0A5A2 114 aa10.13□□□□□ -0.79
CSDE1-213ENST00000530784 SMARCA5O60264 1052 aaPredicted RBP10.13□□□□□ -0.79
CSDE1-213ENST00000530784 GSTCDQ8NEC7 633 aa10.13□□□□□ -0.79
CSDE1-213ENST00000530784 FEZF2Q8TBJ5 459 aa10.13□□□□□ -0.79
CSDE1-213ENST00000530784 FBXW5Q969U6 566 aa10.13□□□□□ -0.79
CSDE1-213ENST00000530784 LUC7LQ9NQ29 371 aaKnown RBP10.13□□□□□ -0.79
CSDE1-213ENST00000530784 SETD1BQ9UPS6 1966 aaKnown RBP10.13□□□□□ -0.79
CSDE1-213ENST00000530784 ZNF644Q9H582 1327 aaPredicted RBP10.12□□□□□ -0.79
CSDE1-213ENST00000530784 MBD5Q9P267 1494 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 LTBP4Q8N2S1 1624 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 SASH1O94885 1247 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 PYGMP11217 842 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 NAT1P18440 290 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 THBS2P35442 1172 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 ADAM9Q13443 819 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 TRIM61Q5EBN2 209 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 GGT6Q6P531 493 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 SP8Q8IXZ3 490 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 CARFQ8N187 725 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 TTLL6Q8N841 843 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 TTLL11Q8NHH1 800 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 SH3RF2Q8TEC5 729 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 SPATA25Q9BR10 227 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 CD244Q9BZW8 370 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 CATSPERZQ9NTU4 200 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 NTMQ9P121 344 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 RBPJLQ9UBG7 517 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 WASF3Q9UPY6 502 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 NUB1Q9Y5A7 615 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 RTEL1-TNFRSF6BF6WH68 1400 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 PTPRKQ15262 1439 aa10.12□□□□□ -0.79
CSDE1-213ENST00000530784 ZNF142P52746 1687 aaPredicted RBP10.12□□□□□ -0.79
CSDE1-213ENST00000530784 PLA2R1Q13018 1463 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms