RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 ESR2Q92731 530 aa13.5□□□□□ -0.25
AMBRA1-207ENST00000529553 NECTIN4Q96NY8 510 aa13.5□□□□□ -0.25
AMBRA1-207ENST00000529553 RNF41Q9H4P4 317 aaPredicted RBP13.5□□□□□ -0.25
AMBRA1-207ENST00000529553 BCAS3Q9H6U6 928 aa13.5□□□□□ -0.25
AMBRA1-207ENST00000529553 LZTS1Q9Y250 596 aa13.5□□□□□ -0.25
AMBRA1-207ENST00000529553 ATG2AQ2TAZ0 1938 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 MBLAC1A4D2B0 266 aaPredicted RBP13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 FSCN2O14926 492 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 PPFIA3O75145 1194 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 TECP42680 631 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 IER5Q5VY09 327 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 SYCE2Q6PIF2 218 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 RUFY4Q6ZNE9 571 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 CYFIP1Q7L576 1253 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 LINC01599Q8WXQ3 324 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 GPKOWQ92917 476 aaPredicted RBP eCLIP13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 INPP4AQ96PE3 977 aaPredicted RBP13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 SENP7Q9BQF6 1050 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 KAT14Q9H8E8 782 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 VAT1LQ9HCJ6 419 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 TTC3P53804 2025 aa13.49□□□□□ -0.25
AMBRA1-207ENST00000529553 MED19A0JLT2 244 aaPredicted RBP13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 GCOM1H8Y6P7 765 aaPredicted RBP13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 DHX16O60231 1041 aaKnown RBP13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 PARP1P09874 1014 aaKnown RBP13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 POLR2MP0CAP2 368 aa13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 SCG2P13521 617 aa13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 ERVFC1P60507 584 aa13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 RBM10P98175 930 aaKnown RBP13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 ITIH3Q06033 890 aa13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 PUM1Q14671 1186 aaKnown RBP eCLIP13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 TPRNQ4KMQ1 711 aa13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 IQCA1Q86XH1 822 aa13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 IL31RAQ8NI17 732 aa13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 RMDN1Q96DB5 314 aa13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 MFSD1Q9H3U5 465 aa13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 AGO3Q9H9G7 860 aaKnown RBP13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 PUF60Q9UHX1 559 aaKnown RBP13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 LRFN2Q9ULH4 789 aa13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 PCDHA1Q9Y5I3 950 aa13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 CDY2AQ9Y6F7 541 aa13.48□□□□□ -0.25
AMBRA1-207ENST00000529553 VPS13AQ96RL7 3174 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 FIBPO43427 364 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 FGF18O76093 207 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 HOXA13P31271 388 aaPredicted RBP13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 CD52P31358 61 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 MRPS6P82932 125 aaKnown RBP13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 MCMDC2Q4G0Z9 681 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 PAN2Q504Q3 1202 aaKnown RBP13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 UTP14CQ5TAP6 766 aaKnown RBP13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 CES5AQ6NT32 575 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 ZDHHC14Q8IZN3 488 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 MIER1Q8N108 512 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 PLCD3Q8N3E9 789 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 GIMAP8Q8ND71 665 aaPredicted RBP13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 DNAJB3Q8WWF6 145 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 MTMR8Q96EF0 704 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 ADAM7Q9H2U9 754 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 NGRNQ9NPE2 291 aaKnown RBP13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 TUBE1Q9UJT0 475 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 PADI3Q9ULW8 664 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 SUPT16HQ9Y5B9 1047 aaKnown RBP13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 ZNF292O60281 2723 aa13.47□□□□□ -0.25
AMBRA1-207ENST00000529553 RRN3P2A6NIE6 340 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 ZBTB5O15062 677 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 LMNAP02545 664 aaKnown RBP13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 AOC1P19801 751 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 MRPS9P82933 396 aaKnown RBP13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 PLCB3Q01970 1234 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 PPFIA1Q13136 1202 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 GRIK4Q16099 956 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 MARCH8Q5T0T0 291 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 TRIM50Q86XT4 487 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 CASP10Q92851 521 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 EVI5LQ96CN4 794 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 RTP3Q9BQQ7 232 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 ZKSCAN3Q9BRR0 538 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 TSHZ2Q9NRE2 1034 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 TMEM260Q9NX78 707 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 ERAP1Q9NZ08 941 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 PCDHB7Q9Y5E2 793 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 MYH7BA7E2Y1 1941 aa13.46□□□□□ -0.25
AMBRA1-207ENST00000529553 C2CD4DB7Z1M9 353 aa13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 MTHFRP42898 656 aa13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 SARSP49591 514 aaKnown RBP13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 SEMA3FQ13275 785 aa13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 ANGPT1Q15389 498 aa13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 SPOUT1Q5T280 376 aaKnown RBP13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 XRRA1Q6P2D8 792 aa13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 CCDC105Q8IYK2 499 aa13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 THNSL1Q8IYQ7 743 aa13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 TNPO1Q92973 898 aaKnown RBP13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 ZFP91Q96JP5 570 aaPredicted RBP13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 ZSCAN10Q96SZ4 725 aaPredicted RBP13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 USTQ9Y2C2 406 aa13.45□□□□□ -0.26
AMBRA1-207ENST00000529553 FRMPD4Q14CM0 1322 aa13.44□□□□□ -0.26
AMBRA1-207ENST00000529553 DNAH14Q0VDD8 3507 aa13.44□□□□□ -0.26
AMBRA1-207ENST00000529553 TRIM6-TRIM34B2RNG4 842 aa13.44□□□□□ -0.26
AMBRA1-207ENST00000529553 M0QZ92 97 aa13.44□□□□□ -0.26
AMBRA1-207ENST00000529553 PPP1R11O60927 126 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms