RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 TOM1L1O75674 476 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 MAP2K2P36507 400 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 NNTQ13423 1086 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 OXER1Q8TDS5 423 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 STRBPQ96SI9 672 aaKnown RBP8.78□□□□□ -1
CTNND1-220ENST00000529526 EIF3CQ99613 913 aaKnown RBP8.78□□□□□ -1
CTNND1-220ENST00000529526 MSTO1Q9BUK6 570 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 SPZ1Q9BXG8 430 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 LRFN2Q9ULH4 789 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 ANGPTL3Q9Y5C1 460 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 PALLDQ8WX93 1383 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 CDK12Q9NYV4 1490 aaPredicted RBP8.78□□□□□ -1
CTNND1-220ENST00000529526 PLS3P13797 630 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 IRX4P78413 519 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 PSMD2Q13200 908 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 KRT27Q7Z3Y8 459 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 ANKARQ7Z5J8 1434 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 SPATS2Q86XZ4 545 aaKnown RBP8.78□□□□□ -1
CTNND1-220ENST00000529526 CHMP6Q96FZ7 201 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 PBKQ96KB5 322 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 G3BP2Q9UN86 482 aaKnown RBP8.78□□□□□ -1
CTNND1-220ENST00000529526 PPME1Q9Y570 386 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 MBD5Q9P267 1494 aa8.78□□□□□ -1
CTNND1-220ENST00000529526 H7C1W4 665 aa8.77□□□□□ -1
CTNND1-220ENST00000529526 GH2P01242 217 aa8.77□□□□□ -1
CTNND1-220ENST00000529526 RPSAP08865 295 aaKnown RBP8.77□□□□□ -1
CTNND1-220ENST00000529526 ARL4AP40617 200 aa8.77□□□□□ -1
CTNND1-220ENST00000529526 DR1Q01658 176 aa8.77□□□□□ -1
CTNND1-220ENST00000529526 NOVA2Q9UNW9 492 aaKnown RBP8.77□□□□□ -1
CTNND1-220ENST00000529526 SRGAP2O75044 1071 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 CYP2E1P05181 493 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-220ENST00000529526 MYL1P05976 194 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 PRR29P0C7W0 189 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 ZNF18P17022 549 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 ZSCAN20P17040 1043 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-220ENST00000529526 SUPT20HL1Q3ZLR7 823 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 FAM83BQ5T0W9 1011 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 SCYL3Q8IZE3 742 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 DEPDC1BQ8WUY9 529 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 ATP6V1E2Q96A05 226 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 TMEM260Q9NX78 707 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 PRPSAP2O60256 369 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 LIFRP42702 1097 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 CLCN6P51797 869 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 COG7P83436 770 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 TMC4Q7Z404 712 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 RAB44Q7Z6P3 723 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-220ENST00000529526 PANX2Q96RD6 677 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 MRPL47Q9HD33 250 aaKnown RBP8.77□□□□□ -1.01
CTNND1-220ENST00000529526 PCDHA6Q9UN73 950 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 PCDHA8Q9Y5H6 950 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 SHROOM2Q13796 1616 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 PRDX5P30044 214 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 ZNF394Q53GI3 561 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 TMTC4Q5T4D3 741 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 JPH2Q9BR39 696 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-220ENST00000529526 RPF1Q9H9Y2 349 aaKnown RBP8.77□□□□□ -1.01
CTNND1-220ENST00000529526 ABCB6Q9NP58 842 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 TPX2Q9ULW0 747 aaKnown RBP8.77□□□□□ -1.01
CTNND1-220ENST00000529526 JRKLQ9Y4A0 524 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 ABCB11O95342 1321 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 C21orf2O43822 256 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 MFAP3LO75121 409 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 TMTC3Q6ZXV5 915 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 VCX3AQ9NNX9 186 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 UBN1Q9NPG3 1134 aa8.77□□□□□ -1.01
CTNND1-220ENST00000529526 CTNND1O60716 968 aaKnown RBP8.76□□□□□ -1.01
CTNND1-220ENST00000529526 MYO1EQ12965 1108 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 THOC5Q13769 683 aaKnown RBP8.76□□□□□ -1.01
CTNND1-220ENST00000529526 RNF207Q6ZRF8 634 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 PASD1Q8IV76 773 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 SIX6OS1Q8N1H7 587 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 SLC44A5Q8NCS7 719 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 HVCN1Q96D96 273 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 LRRC4Q9HBW1 653 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 ADAMTS1Q9UHI8 967 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 NFU1Q9UMS0 254 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 PTCH1Q13635 1447 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 MT-ND3P03897 115 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 IGKV5-2P06315 115 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 NPR1P16066 1061 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 TCP11Q8WWU5 503 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 BAG5Q9UL15 447 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 INPP5FQ9Y2H2 1132 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 ACSL3O95573 720 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 XPAP23025 273 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-220ENST00000529526 CRKP46108 304 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 SEPT2Q15019 361 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 E2F5Q15329 346 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 ARMC9Q7Z3E5 817 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 FAM49AQ9H0Q0 323 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-220ENST00000529526 RAVER2Q9HCJ3 691 aaKnown RBP8.76□□□□□ -1.01
CTNND1-220ENST00000529526 GINM1Q9NU53 330 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 PALMO75781 387 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 RXRBP28702 533 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 BBS9Q3SYG4 887 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 THOC1Q96FV9 657 aaKnown RBP8.76□□□□□ -1.01
CTNND1-220ENST00000529526 EXOC1LA0A1B0GW35 172 aa8.76□□□□□ -1.01
CTNND1-220ENST00000529526 TYW5A2RUC4 315 aaKnown RBP8.76□□□□□ -1.01
CTNND1-220ENST00000529526 GOLGA8CPA6NN73 597 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms