RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 RCCD1A6NED2 376 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 SPDYE3A6NKU9 549 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 ADAMTS3O15072 1205 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 DYNC1LI2O43237 492 aaPredicted RBP7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 ICMTO60725 284 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 ADAMTS4O75173 837 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 STAM2O75886 525 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 CD2BP2O95400 341 aaKnown RBP7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 TXNP10599 105 aaKnown RBP7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 TGFB3P10600 412 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 IBSPP21815 317 aaPredicted RBP7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 SCP2P22307 547 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 CCND2P30279 289 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 GJA9P57773 515 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 NLRP5P59047 1200 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 MRPS9P82933 396 aaKnown RBP7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 MTA1Q13330 715 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 AP3B2Q13367 1082 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 DUSP28Q4G0W2 176 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 PCNX4Q63HM2 1172 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 MCTP2Q6DN12 878 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 GALNT17Q6IS24 598 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 ZNF280DQ6N043 979 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 SEPT14Q6ZU15 432 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 CCDC83Q8IWF9 413 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 KLHDC9Q8NEP7 349 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 CCDC148Q8NFR7 591 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 IL31RAQ8NI17 732 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 BICD2Q8TD16 824 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 SCFD2Q8WU76 684 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 WASF1Q92558 559 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 PAWRQ96IZ0 340 aaKnown RBP7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 AIFM3Q96NN9 605 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 CCSER2Q9H7U1 834 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 XPNPEP3Q9NQH7 507 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 RTEL1Q9NZ71 1219 aa7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 MKI67P46013 3256 aaKnown RBP7.13□□□□□ -1.27
ATPAF1-209ENST00000529214 PPP1R3GB7ZBB8 358 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 M0R2N6 131 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 DNM1LO00429 736 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 NKRFO15226 690 aaKnown RBP eCLIP7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 CTAGE5O15320 804 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 JAK2O60674 1132 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 PGK1P00558 417 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 COL6A1P12109 1028 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 XBP1P17861 261 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 ICAM3P32942 547 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 SLC20A2Q08357 652 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 TTLL4Q14679 1199 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 LRRC41Q15345 812 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 NPY5RQ15761 445 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 ZKSCAN8Q15776 578 aaPredicted RBP7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 LY6KQ17RY6 165 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 GJC2Q5T442 439 aaPredicted RBP7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 JAKMIP3Q5VZ66 844 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 CCSAPQ6IQ19 270 aaPredicted RBP7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 KCNV1Q6PIU1 500 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 ADGRD1Q6QNK2 874 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 NECAB2Q7Z6G3 386 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 RNF180Q86T96 592 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 ANKMY2Q8IV38 441 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 DEPDC4Q8N2C3 294 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 CRYGNQ8WXF5 182 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 LENG1Q96BZ8 264 aaPredicted RBP7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 TMX3Q96JJ7 454 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 INPP4AQ96PE3 977 aaPredicted RBP7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 TSEN34Q9BSV6 310 aaKnown RBP7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 ALG1Q9BT22 464 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 PHF20Q9BVI0 1012 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 ANO3Q9BYT9 981 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 UPF3AQ9H1J1 476 aaKnown RBP7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 SPC25Q9HBM1 224 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 GJB4Q9NTQ9 266 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 TMEM260Q9NX78 707 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 DDX41Q9UJV9 622 aaKnown RBP7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 PCDHA4Q9UN74 947 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 LCTP09848 1927 aa7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 KIAA0100Q14667 2235 aaKnown RBP7.12□□□□□ -1.27
ATPAF1-209ENST00000529214 SPATA31C2B4DYI2 1134 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 FARP2O94887 1054 aaPredicted RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 ARIH2O95376 493 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 CYP3A4P08684 503 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 C6orf222P0C671 652 aaPredicted RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 ITGB5P18084 799 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 PTGS1P23219 599 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 CST5P28325 142 aaPredicted RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 SREBF1P36956 1147 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 MCCD1P59942 119 aaPredicted RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 SP2Q02086 613 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 KCNA10Q16322 511 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 GNASQ5JWF2 1037 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 TLK2Q86UE8 772 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 NLRX1Q86UT6 975 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 BLIDQ8IZY5 108 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 REXO1Q8N1G1 1221 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 DAGLBQ8NCG7 672 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 DIS3LQ8TF46 1054 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 PTCD2Q8WV60 388 aaKnown RBP7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 COPS5Q92905 334 aa7.11□□□□□ -1.27
ATPAF1-209ENST00000529214 PGBD1Q96JS3 809 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms