RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 GPR20Q99678 358 aa27.7■■■□□ 2.02
LDLRAD3-203ENST00000528989 MTRQ99707 1265 aa27.7■■■□□ 2.02
LDLRAD3-203ENST00000528989 GNEQ9Y223 722 aaKnown RBP27.7■■■□□ 2.02
LDLRAD3-203ENST00000528989 ATG7O95352 703 aa27.69■■■□□ 2.02
LDLRAD3-203ENST00000528989 P4HBP07237 508 aaKnown RBP27.69■■■□□ 2.02
LDLRAD3-203ENST00000528989 SLFN14P0C7P3 912 aa27.69■■■□□ 2.02
LDLRAD3-203ENST00000528989 PRKAR2AP13861 404 aaKnown RBP27.69■■■□□ 2.02
LDLRAD3-203ENST00000528989 IRX5P78411 483 aaPredicted RBP27.69■■■□□ 2.02
LDLRAD3-203ENST00000528989 CCDC60Q8IWA6 550 aaPredicted RBP27.69■■■□□ 2.02
LDLRAD3-203ENST00000528989 GH1P01241 217 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 CNGA1P29973 690 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 TRMT44Q8IYL2 757 aaKnown RBP27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 PIGOQ8TEQ8 1089 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 TUFT1Q9NNX1 390 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 GABBR1Q9UBS5 961 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 NOP56O00567 594 aaKnown RBP27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 DYNC1LI2O43237 492 aaPredicted RBP27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 PSAPP07602 524 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 SUPT20HL2P0C7V6 817 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 CCND3P30281 292 aaPredicted RBP27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 TCF7P36402 384 aaPredicted RBP27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 AFMP43652 599 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 DHX8Q14562 1220 aaKnown RBP27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 PXYLP1Q8TE99 480 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 AFG1LQ8WV93 481 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 SEPT1Q8WYJ6 367 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 PCYT2Q99447 389 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 CLSTN2Q9H4D0 955 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 FAM184BQ9ULE4 1060 aa27.68■■■□□ 2.02
LDLRAD3-203ENST00000528989 KDM3AQ9Y4C1 1321 aa27.67■■■□□ 2.02
LDLRAD3-203ENST00000528989 CASP1P29466 404 aa27.67■■■□□ 2.02
LDLRAD3-203ENST00000528989 QARSP47897 775 aaKnown RBP27.67■■■□□ 2.02
LDLRAD3-203ENST00000528989 LAMC2Q13753 1193 aa27.67■■■□□ 2.02
LDLRAD3-203ENST00000528989 MIS18BP1Q6P0N0 1132 aa27.67■■■□□ 2.02
LDLRAD3-203ENST00000528989 RDM1Q8NG50 284 aa27.67■■■□□ 2.02
LDLRAD3-203ENST00000528989 TIGD1Q96MW7 591 aa27.67■■■□□ 2.02
LDLRAD3-203ENST00000528989 NT5C3AQ9H0P0 336 aa27.67■■■□□ 2.02
LDLRAD3-203ENST00000528989 NUP62CLQ9H1M0 184 aa27.67■■■□□ 2.02
LDLRAD3-203ENST00000528989 STK24Q9Y6E0 443 aa27.67■■■□□ 2.02
LDLRAD3-203ENST00000528989 BACH1O14867 736 aa27.66■■■□□ 2.02
LDLRAD3-203ENST00000528989 HMGCRP04035 888 aa27.66■■■□□ 2.02
LDLRAD3-203ENST00000528989 HSPA8P11142 646 aaKnown RBP27.66■■■□□ 2.02
LDLRAD3-203ENST00000528989 MCM6Q14566 821 aa27.66■■■□□ 2.02
LDLRAD3-203ENST00000528989 CEP57L1Q8IYX8 460 aa27.66■■■□□ 2.02
LDLRAD3-203ENST00000528989 PAGE5Q96GU1 130 aa27.66■■■□□ 2.02
LDLRAD3-203ENST00000528989 CASP8AP2Q9UKL3 1982 aa27.66■■■□□ 2.02
LDLRAD3-203ENST00000528989 OR6J1Q8NGC5 347 aa27.66■■■□□ 2.02
LDLRAD3-203ENST00000528989 IGKV6D-21A0A0A0MT36 114 aa27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 TMEM150BA6NC51 233 aa27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 ZNF862O60290 1169 aa27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 LBX1P52954 281 aa27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 PRMT2P55345 433 aa27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 MDM2Q00987 491 aaPredicted RBP27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 CCDC183Q5T5S1 534 aa27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 TRIM50Q86XT4 487 aa27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 CKAP2LQ8IYA6 745 aa27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 EMID1Q96A84 441 aaPredicted RBP27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 TNMDQ9H2S6 317 aa27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 ZSWIM4Q9H7M6 989 aa27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 NRBP1Q9UHY1 535 aa27.65■■■□□ 2.02
LDLRAD3-203ENST00000528989 PRR29P0C7W0 189 aa27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 HSPA1AP0DMV8 641 aaKnown RBP27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 HSPA1BP0DMV9 641 aaKnown RBP27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 AKR1A1P14550 325 aa27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 GRK4P32298 578 aa27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 PSMC5P62195 406 aa27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 PNOCQ13519 176 aa27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 TLK2Q86UE8 772 aa27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 PPTC7Q8NI37 304 aa27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 RAD54LQ92698 747 aa27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 SH2D3AQ9BRG2 576 aa27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 PYM1Q9BRP8 204 aaKnown RBP27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 DNM3Q9UQ16 869 aa27.64■■■□□ 2.02
LDLRAD3-203ENST00000528989 NKRFO15226 690 aaKnown RBP eCLIP27.64■■■□□ 2.01
LDLRAD3-203ENST00000528989 ATP4AP20648 1035 aa27.64■■■□□ 2.01
LDLRAD3-203ENST00000528989 UTP14CQ5TAP6 766 aaKnown RBP27.64■■■□□ 2.01
LDLRAD3-203ENST00000528989 MAP3K21Q5TCX8 1036 aa27.64■■■□□ 2.01
LDLRAD3-203ENST00000528989 NEK9Q8TD19 979 aa27.64■■■□□ 2.01
LDLRAD3-203ENST00000528989 SH3TC2Q8TF17 1288 aa27.64■■■□□ 2.01
LDLRAD3-203ENST00000528989 LARP4BQ92615 738 aaKnown RBP27.64■■■□□ 2.01
LDLRAD3-203ENST00000528989 ZNF302Q9NR11 478 aa27.64■■■□□ 2.01
LDLRAD3-203ENST00000528989 PTPN22Q9Y2R2 807 aa27.64■■■□□ 2.01
LDLRAD3-203ENST00000528989 INHAP05111 366 aa27.63■■■□□ 2.01
LDLRAD3-203ENST00000528989 SH3RF1Q7Z6J0 888 aa27.63■■■□□ 2.01
LDLRAD3-203ENST00000528989 SLAIN1Q8ND83 568 aa27.63■■■□□ 2.01
LDLRAD3-203ENST00000528989 KBTBD4Q9NVX7 518 aa27.63■■■□□ 2.01
LDLRAD3-203ENST00000528989 STK17AQ9UEE5 414 aa27.63■■■□□ 2.01
LDLRAD3-203ENST00000528989 MAFBQ9Y5Q3 323 aaPredicted RBP27.63■■■□□ 2.01
LDLRAD3-203ENST00000528989 SLC26A4O43511 780 aa27.62■■■□□ 2.01
LDLRAD3-203ENST00000528989 SSBP05455 408 aaKnown RBP eCLIP27.62■■■□□ 2.01
LDLRAD3-203ENST00000528989 BLZF1Q9H2G9 400 aa27.62■■■□□ 2.01
LDLRAD3-203ENST00000528989 BHMT2Q9H2M3 363 aa27.62■■■□□ 2.01
LDLRAD3-203ENST00000528989 USP25Q9UHP3 1055 aa27.62■■■□□ 2.01
LDLRAD3-203ENST00000528989 SEPT4O43236 478 aa27.61■■■□□ 2.01
LDLRAD3-203ENST00000528989 PLA2G4BP0C869 781 aa27.61■■■□□ 2.01
LDLRAD3-203ENST00000528989 STAT5BP51692 787 aa27.61■■■□□ 2.01
LDLRAD3-203ENST00000528989 C4orf19Q8IY42 314 aa27.61■■■□□ 2.01
LDLRAD3-203ENST00000528989 NACC1Q96RE7 527 aa27.61■■■□□ 2.01
LDLRAD3-203ENST00000528989 STBD1O95210 358 aa27.61■■■□□ 2.01
LDLRAD3-203ENST00000528989 YWHABP31946 246 aaKnown RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms