RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 PCDHA1Q9Y5I3 950 aa20.61■□□□□ 0.89
LTBP3-211ENST00000528966 DMXL1Q9Y485 3027 aa20.61■□□□□ 0.89
LTBP3-211ENST00000528966 TRIM6-TRIM34B2RNG4 842 aa20.6■□□□□ 0.89
LTBP3-211ENST00000528966 NUBP1P53384 320 aa20.6■□□□□ 0.89
LTBP3-211ENST00000528966 NMIQ13287 307 aaPredicted RBP20.6■□□□□ 0.89
LTBP3-211ENST00000528966 NEDD9Q14511 834 aa20.6■□□□□ 0.89
LTBP3-211ENST00000528966 PAN2Q504Q3 1202 aaKnown RBP20.6■□□□□ 0.89
LTBP3-211ENST00000528966 CCDC178Q5BJE1 867 aa20.6■□□□□ 0.89
LTBP3-211ENST00000528966 TAF2Q6P1X5 1199 aa20.6■□□□□ 0.89
LTBP3-211ENST00000528966 TSHZ1Q6ZSZ6 1077 aa20.6■□□□□ 0.89
LTBP3-211ENST00000528966 FCHSD1Q86WN1 690 aa20.6■□□□□ 0.89
LTBP3-211ENST00000528966 SAMD3Q8N6K7 520 aa20.6■□□□□ 0.89
LTBP3-211ENST00000528966 RIPOR3Q96MK2 946 aa20.6■□□□□ 0.89
LTBP3-211ENST00000528966 ZSCAN10Q96SZ4 725 aaPredicted RBP20.6■□□□□ 0.89
LTBP3-211ENST00000528966 TLE6Q9H808 572 aa20.6■□□□□ 0.89
LTBP3-211ENST00000528966 SPATA31C2B4DYI2 1134 aa20.59■□□□□ 0.89
LTBP3-211ENST00000528966 PER2O15055 1255 aa20.59■□□□□ 0.89
LTBP3-211ENST00000528966 ZBTB5O15062 677 aa20.59■□□□□ 0.89
LTBP3-211ENST00000528966 GNPTABQ3T906 1256 aa20.59■□□□□ 0.89
LTBP3-211ENST00000528966 TRPC6Q9Y210 931 aa20.59■□□□□ 0.89
LTBP3-211ENST00000528966 CDY2AQ9Y6F7 541 aa20.59■□□□□ 0.89
LTBP3-211ENST00000528966 FRMPD4Q14CM0 1322 aa20.58■□□□□ 0.89
LTBP3-211ENST00000528966 B4E1Z4 1266 aa20.58■□□□□ 0.89
LTBP3-211ENST00000528966 GCOM1H8Y6P7 765 aaPredicted RBP20.58■□□□□ 0.89
LTBP3-211ENST00000528966 POLR2MP0CAP2 368 aa20.58■□□□□ 0.89
LTBP3-211ENST00000528966 CD52P31358 61 aa20.58■□□□□ 0.89
LTBP3-211ENST00000528966 NBL1P41271 181 aa20.58■□□□□ 0.89
LTBP3-211ENST00000528966 GATMP50440 423 aa20.58■□□□□ 0.89
LTBP3-211ENST00000528966 ERMP1Q7Z2K6 904 aa20.58■□□□□ 0.89
LTBP3-211ENST00000528966 NPAS4Q8IUM7 802 aa20.58■□□□□ 0.89
LTBP3-211ENST00000528966 DNAJB3Q8WWF6 145 aa20.58■□□□□ 0.89
LTBP3-211ENST00000528966 EP300Q09472 2414 aaPredicted RBP20.58■□□□□ 0.88
LTBP3-211ENST00000528966 KLRF2D3W0D1 207 aa20.57■□□□□ 0.88
LTBP3-211ENST00000528966 PPFIA3O75145 1194 aa20.57■□□□□ 0.88
LTBP3-211ENST00000528966 SP4Q02446 784 aa20.57■□□□□ 0.88
LTBP3-211ENST00000528966 SLC35G1Q2M3R5 365 aa20.57■□□□□ 0.88
LTBP3-211ENST00000528966 FNDC1Q4ZHG4 1894 aaPredicted RBP20.57■□□□□ 0.88
LTBP3-211ENST00000528966 ZSWIM5Q9P217 1185 aa20.57■□□□□ 0.88
LTBP3-211ENST00000528966 TUBE1Q9UJT0 475 aa20.57■□□□□ 0.88
LTBP3-211ENST00000528966 PCDHB15Q9Y5E8 787 aa20.57■□□□□ 0.88
LTBP3-211ENST00000528966 MBLAC1A4D2B0 266 aaPredicted RBP20.56■□□□□ 0.88
LTBP3-211ENST00000528966 ZNF213O14771 459 aa20.56■□□□□ 0.88
LTBP3-211ENST00000528966 FIBPO43427 364 aa20.56■□□□□ 0.88
LTBP3-211ENST00000528966 NT5C2P49902 561 aa20.56■□□□□ 0.88
LTBP3-211ENST00000528966 PPFIA1Q13136 1202 aa20.56■□□□□ 0.88
LTBP3-211ENST00000528966 DUSP6Q16828 381 aa20.56■□□□□ 0.88
LTBP3-211ENST00000528966 MARCH8Q5T0T0 291 aa20.56■□□□□ 0.88
LTBP3-211ENST00000528966 RSPH3Q86UC2 560 aa20.56■□□□□ 0.88
LTBP3-211ENST00000528966 TMEM105Q8N8V8 129 aa20.56■□□□□ 0.88
LTBP3-211ENST00000528966 S1PR5Q9H228 398 aa20.56■□□□□ 0.88
LTBP3-211ENST00000528966 RTEL1Q9NZ71 1219 aa20.56■□□□□ 0.88
LTBP3-211ENST00000528966 STAM2O75886 525 aa20.55■□□□□ 0.88
LTBP3-211ENST00000528966 SP100P23497 879 aaPredicted RBP20.55■□□□□ 0.88
LTBP3-211ENST00000528966 MRPS6P82932 125 aaKnown RBP20.55■□□□□ 0.88
LTBP3-211ENST00000528966 KCNC3Q14003 757 aa20.55■□□□□ 0.88
LTBP3-211ENST00000528966 GRIK4Q16099 956 aa20.55■□□□□ 0.88
LTBP3-211ENST00000528966 ZBTB33Q86T24 672 aa20.55■□□□□ 0.88
LTBP3-211ENST00000528966 MICAL1Q8TDZ2 1067 aa20.55■□□□□ 0.88
LTBP3-211ENST00000528966 NEK1Q96PY6 1258 aa20.55■□□□□ 0.88
LTBP3-211ENST00000528966 MAD2L2Q9UI95 211 aa20.55■□□□□ 0.88
LTBP3-211ENST00000528966 TCF7P36402 384 aaPredicted RBP20.54■□□□□ 0.88
LTBP3-211ENST00000528966 PDE1AP54750 535 aa20.54■□□□□ 0.88
LTBP3-211ENST00000528966 HOMER1Q86YM7 354 aa20.54■□□□□ 0.88
LTBP3-211ENST00000528966 KREMEN2Q8NCW0 462 aa20.54■□□□□ 0.88
LTBP3-211ENST00000528966 ZBTB10Q96DT7 871 aa20.54■□□□□ 0.88
LTBP3-211ENST00000528966 SENP7Q9BQF6 1050 aa20.54■□□□□ 0.88
LTBP3-211ENST00000528966 FTHL17Q9BXU8 183 aa20.54■□□□□ 0.88
LTBP3-211ENST00000528966 DNAH14Q0VDD8 3507 aa20.54■□□□□ 0.88
LTBP3-211ENST00000528966 CACNA1BQ00975 2339 aa20.54■□□□□ 0.88
LTBP3-211ENST00000528966 STAG3L1P0CL83 205 aa20.53■□□□□ 0.88
LTBP3-211ENST00000528966 SCG2P13521 617 aa20.53■□□□□ 0.88
LTBP3-211ENST00000528966 MARK3P27448 753 aa20.53■□□□□ 0.88
LTBP3-211ENST00000528966 ID4P47928 161 aa20.53■□□□□ 0.88
LTBP3-211ENST00000528966 ERVFC1P60507 584 aa20.53■□□□□ 0.88
LTBP3-211ENST00000528966 UBE3AQ05086 875 aa20.53■□□□□ 0.88
LTBP3-211ENST00000528966 SYCE2Q6PIF2 218 aa20.53■□□□□ 0.88
LTBP3-211ENST00000528966 TMEM184AQ6ZMB5 413 aa20.53■□□□□ 0.88
LTBP3-211ENST00000528966 TICAM2Q86XR7 235 aa20.53■□□□□ 0.88
LTBP3-211ENST00000528966 PIGSQ96S52 555 aa20.53■□□□□ 0.88
LTBP3-211ENST00000528966 CDCA3Q99618 268 aaPredicted RBP20.53■□□□□ 0.88
LTBP3-211ENST00000528966 PALM3A6NDB9 673 aaPredicted RBP20.52■□□□□ 0.88
LTBP3-211ENST00000528966 BRD1O95696 1058 aa20.52■□□□□ 0.88
LTBP3-211ENST00000528966 ANKRD54Q6NXT1 300 aa20.52■□□□□ 0.88
LTBP3-211ENST00000528966 FRMD5Q7Z6J6 570 aa20.52■□□□□ 0.88
LTBP3-211ENST00000528966 APOL5Q9BWW9 433 aa20.52■□□□□ 0.88
LTBP3-211ENST00000528966 PADI3Q9ULW8 664 aa20.52■□□□□ 0.88
LTBP3-211ENST00000528966 SQORQ9Y6N5 450 aa20.52■□□□□ 0.88
LTBP3-211ENST00000528966 EPG5Q9HCE0 2579 aa20.52■□□□□ 0.88
LTBP3-211ENST00000528966 FRYLO94915 3013 aa20.51■□□□□ 0.87
LTBP3-211ENST00000528966 NCOR2Q9Y618 2525 aa20.51■□□□□ 0.87
LTBP3-211ENST00000528966 FSD2A1L4K1 749 aa20.51■□□□□ 0.87
LTBP3-211ENST00000528966 FSCN2O14926 492 aa20.51■□□□□ 0.87
LTBP3-211ENST00000528966 IFIT1BQ5T764 474 aaKnown RBP20.51■□□□□ 0.87
LTBP3-211ENST00000528966 FAM49AQ9H0Q0 323 aaPredicted RBP20.51■□□□□ 0.87
LTBP3-211ENST00000528966 TMX1Q9H3N1 280 aa20.51■□□□□ 0.87
LTBP3-211ENST00000528966 SMOC2Q9H3U7 446 aa20.51■□□□□ 0.87
LTBP3-211ENST00000528966 RIOX1Q9H6W3 641 aa20.51■□□□□ 0.87
LTBP3-211ENST00000528966 HCSTQ9UBK5 93 aa20.51■□□□□ 0.87
LTBP3-211ENST00000528966 CDH22Q9UJ99 828 aa20.51■□□□□ 0.87
LTBP3-211ENST00000528966 PCDHB12Q9Y5F1 795 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms