RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 TRIM50Q86XT4 487 aa8.19□□□□□ -1.1
ITGB1-218ENST00000528877 FAM126BQ8IXS8 530 aa8.19□□□□□ -1.1
ITGB1-218ENST00000528877 NSUN6Q8TEA1 469 aaKnown RBP8.19□□□□□ -1.1
ITGB1-218ENST00000528877 TMEM87BQ96K49 555 aa8.19□□□□□ -1.1
ITGB1-218ENST00000528877 IWS1Q96ST2 819 aa8.19□□□□□ -1.1
ITGB1-218ENST00000528877 SPZ1Q9BXG8 430 aa8.19□□□□□ -1.1
ITGB1-218ENST00000528877 PDGFCQ9NRA1 345 aa8.19□□□□□ -1.1
ITGB1-218ENST00000528877 COL20A1Q9P218 1284 aa8.19□□□□□ -1.1
ITGB1-218ENST00000528877 DDX49Q9Y6V7 483 aaKnown RBP8.19□□□□□ -1.1
ITGB1-218ENST00000528877 MYH6P13533 1939 aa8.19□□□□□ -1.1
ITGB1-218ENST00000528877 EYSQ5T1H1 3165 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 DCDC2CA8MYV0 355 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 PRC1O43663 620 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 CYTH3O43739 400 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 ZEB2O60315 1214 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 CDC45O75419 566 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 CD4P01730 458 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 RHOQP17081 205 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 ITGB8P26012 769 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 MCM5P33992 734 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 GDF10P55107 478 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 POU4F2Q12837 409 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 TLR1Q15399 786 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 CREB3L3Q68CJ9 461 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 TMEM214Q6NUQ4 689 aaKnown RBP8.18□□□□□ -1.1
ITGB1-218ENST00000528877 CCDC62Q6P9F0 684 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 FOXR1Q6PIV2 292 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 SGMS1Q86VZ5 419 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 ZNF654Q8IZM8 581 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 WDR11Q9BZH6 1224 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 AP5M1Q9H0R1 490 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 ETNK1Q9HBU6 452 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 TIMMDC1Q9NPL8 285 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 ANO2Q9NQ90 1003 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 PRDM5Q9NQX1 630 aaPredicted RBP8.18□□□□□ -1.1
ITGB1-218ENST00000528877 PCDHA1Q9Y5I3 950 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 A0A0C4DFX4 3053 aa8.18□□□□□ -1.1
ITGB1-218ENST00000528877 TANC1Q9C0D5 1861 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 KIAA1217Q5T5P2 1943 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 CHD7Q9P2D1 2997 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 UNC80Q8N2C7 3258 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 PNMA6FA0A0J9YX94 578 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 A0A1B0GTH6 734 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 CDC14CA4D256 554 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 POM121CA8CG34 1229 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 PIK3CDO00329 1044 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 TLR3O15455 904 aaKnown RBP8.17□□□□□ -1.1
ITGB1-218ENST00000528877 DHX16O60231 1041 aaKnown RBP8.17□□□□□ -1.1
ITGB1-218ENST00000528877 KPNA6O60684 536 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 ARIH2O95376 493 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 TIMP1P01033 207 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 CALM1P0DP23 149 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 CALM2P0DP24 149 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 CALM3P0DP25 149 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 HOXD8P13378 290 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-218ENST00000528877 KIF5BP33176 963 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 RCAN1P53805 252 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 PURAQ00577 322 aaKnown RBP8.17□□□□□ -1.1
ITGB1-218ENST00000528877 BEX3Q00994 111 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 FPGSQ05932 587 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 COL9A3Q14050 684 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-218ENST00000528877 TTLL4Q14679 1199 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 TMEM63BQ5T3F8 832 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 FAM109BQ6ICB4 259 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-218ENST00000528877 CASC1Q6TDU7 716 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 CXCL17Q6UXB2 119 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 EEPD1Q7L9B9 569 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 TEX2Q8IWB9 1127 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 TRIM22Q8IYM9 498 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 TMTC2Q8N394 836 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 RHBDD1Q8TEB9 315 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 BADQ92934 168 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 RMDN3Q96TC7 470 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 LZTS2Q9BRK4 669 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 PXMP2Q9NR77 195 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 TMEM39AQ9NV64 488 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 GRIN2DO15399 1336 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 NID2Q14112 1375 aa8.17□□□□□ -1.1
ITGB1-218ENST00000528877 TRANK1O15050 2925 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 BACH1O14867 736 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 DYNC1LI2O43237 492 aaPredicted RBP8.16□□□□□ -1.1
ITGB1-218ENST00000528877 EPB41L2O43491 1005 aaKnown RBP8.16□□□□□ -1.1
ITGB1-218ENST00000528877 ATP9BO43861 1147 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 EIF3JO75822 258 aaKnown RBP8.16□□□□□ -1.1
ITGB1-218ENST00000528877 TXNP10599 105 aaKnown RBP8.16□□□□□ -1.1
ITGB1-218ENST00000528877 RAG1P15918 1043 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 PTGS1P23219 599 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 GNAQP50148 359 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 ATP1A2P50993 1020 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 ARHGAP1Q07960 439 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 ITGA7Q13683 1181 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 NCOA4Q13772 614 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 KRT32Q14532 448 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 STXBP2Q15833 593 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 BRDTQ58F21 947 aaPredicted RBP8.16□□□□□ -1.1
ITGB1-218ENST00000528877 MFSD5Q6N075 450 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 NFRKBQ6P4R8 1299 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 NOL8Q76FK4 1167 aaKnown RBP8.16□□□□□ -1.1
ITGB1-218ENST00000528877 CHST3Q7LGC8 479 aa8.16□□□□□ -1.1
ITGB1-218ENST00000528877 SKAP1Q86WV1 359 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms