RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SWSAP1Q6NVH7 229 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 MIS18BP1Q6P0N0 1132 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CATSPER3Q86XQ3 398 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CCDC60Q8IWA6 550 aaPredicted RBP13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 BANK1Q8NDB2 785 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 MRPS27Q92552 414 aaKnown RBP13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 DEFB118Q96PH6 123 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PNMA5Q96PV4 448 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PCYT2Q99447 389 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PANK2Q9BZ23 570 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 AP5M1Q9H0R1 490 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 UPF3AQ9H1J1 476 aaKnown RBP13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 WRAP73Q9P2S5 460 aaPredicted RBP13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 SYNRGQ9UMZ2 1314 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 FAM237AA0A1B0GTK4 181 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 POTEB3A0JP26 581 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 MYADML2A6NDP7 307 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PSAPP07602 524 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 GJB1P08034 283 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 MMP3P08254 477 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 HOXD8P13378 290 aaPredicted RBP13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PFKFB1P16118 471 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 RPA1P27694 616 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 NDUFA8P51970 172 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 BEX3Q00994 111 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 GRB10Q13322 594 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CTTNQ14247 550 aaKnown RBP13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ZRSR1Q15695 479 aaKnown RBP13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 POTEBQ6S5H4 581 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ERMNQ8TAM6 284 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 U2AF1L4Q8WU68 220 aaKnown RBP13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PLIN2Q99541 437 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 POLR3CQ9BUI4 534 aaPredicted RBP13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 XPNPEP3Q9NQH7 507 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 FAM13BQ9NYF5 915 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 GABBR1Q9UBS5 961 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 HPSEQ9Y251 543 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ADAMTS4O75173 837 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 LGR5O75473 907 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 P4HBP07237 508 aaKnown RBP13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 C6orf222P0C671 652 aaPredicted RBP13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 LIG1P18858 919 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 GJA8P48165 433 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 NKX3-2P78367 333 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 FSCN1Q16658 493 aaKnown RBP13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 HYIQ5T013 277 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 UTP14CQ5TAP6 766 aaKnown RBP13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 HAUS3Q68CZ6 603 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 TRIM50Q86XT4 487 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 TPH2Q8IWU9 490 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PDILTQ8N807 584 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 LRRC15Q8TF66 581 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 KCNH3Q9ULD8 1083 aa13.63□□□□□ -0.23
TRAF3IP2-211ENST00000528599 A0A087WWV3 80 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 BACH1O14867 736 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ZNF862O60290 1169 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 MSCO60682 206 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 SGPL1O95470 568 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 LGALS2P05162 132 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 TXLNAP40222 546 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 QARSP47897 775 aaKnown RBP13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 TMEM119Q4V9L6 283 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 POTEGQ6S5H5 508 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 KCNK18Q7Z418 384 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ENGASEQ8NFI3 743 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 NEK9Q8TD19 979 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 LXNQ9BS40 222 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 TMEM106CQ9BVX2 250 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ZNF302Q9NR11 478 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 KIAA1024Q9UPX6 916 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 MAFBQ9Y5Q3 323 aaPredicted RBP13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 STK24Q9Y6E0 443 aa13.62□□□□□ -0.23
TRAF3IP2-211ENST00000528599 SLC26A4O43511 780 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 STBD1O95210 358 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 SLC34A2O95436 690 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PLCG1P19174 1290 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ATP4AP20648 1035 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CPT1AP50416 773 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 STAT5BP51692 787 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PSMC5P62195 406 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 DGKDQ16760 1214 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 GNASQ5JWF2 1037 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 KLHDC9Q8NEP7 349 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 AFAP1L1Q8TED9 768 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 C16orf70Q9BSU1 422 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ZSWIM4Q9H7M6 989 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 SPC25Q9HBM1 224 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 DDX19AQ9NUU7 478 aaKnown RBP13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 EMSYQ7Z589 1322 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 IGSF9BQ9UPX0 1349 aa13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 RANBP2P49792 3224 aaKnown RBP13.61□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ZBTB39O15060 712 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 POLR2DO15514 142 aaKnown RBP13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 NR1I2O75469 434 aa13.6□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ZNF286BP0CG31 522 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms