RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 BCAS3Q9H6U6 928 aa13.28□□□□□ -0.28
CMTM1-211ENST00000528484 EHMT1Q9H9B1 1298 aa13.28□□□□□ -0.28
CMTM1-211ENST00000528484 ALG13Q9NP73 1137 aaKnown RBP13.28□□□□□ -0.28
CMTM1-211ENST00000528484 LRFN2Q9ULH4 789 aa13.28□□□□□ -0.28
CMTM1-211ENST00000528484 CDY2AQ9Y6F7 541 aa13.28□□□□□ -0.28
CMTM1-211ENST00000528484 USP34Q70CQ2 3546 aa13.27□□□□□ -0.28
CMTM1-211ENST00000528484 PIK3CDO00329 1044 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 CYTH3O43739 400 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 DGKIO75912 1065 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 GNAQP50148 359 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 PTPN5P54829 565 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 IGBP1P78318 339 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 MRPS6P82932 125 aaKnown RBP13.27□□□□□ -0.29
CMTM1-211ENST00000528484 DLX2Q07687 328 aaPredicted RBP13.27□□□□□ -0.29
CMTM1-211ENST00000528484 MGAT3Q09327 533 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 PAK2Q13177 524 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 SEMA3FQ13275 785 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 RUFY4Q6ZNE9 571 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 NPAS4Q8IUM7 802 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 EDAQ92838 391 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 ZNF689Q96CS4 500 aaPredicted RBP13.27□□□□□ -0.29
CMTM1-211ENST00000528484 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 SQORQ9Y6N5 450 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 TTC3P53804 2025 aa13.27□□□□□ -0.29
CMTM1-211ENST00000528484 SPDYE3A6NKU9 549 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 MAFGO15525 162 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 TBX10O75333 385 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 SRGAP2BP0DMP2 458 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 TROAPQ12815 778 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 ADAM15Q13444 863 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 MTMR1Q13613 665 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 SPOUT1Q5T280 376 aaKnown RBP13.26□□□□□ -0.29
CMTM1-211ENST00000528484 USP17L6PQ6QN14 398 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 CASC1Q6TDU7 716 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 FAM43BQ6ZT52 329 aaPredicted RBP13.26□□□□□ -0.29
CMTM1-211ENST00000528484 PBXIP1Q96AQ6 731 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 MAP3K14Q99558 947 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 SPZ1Q9BXG8 430 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 FAM49AQ9H0Q0 323 aaPredicted RBP13.26□□□□□ -0.29
CMTM1-211ENST00000528484 RC3H2Q9HBD1 1191 aaKnown RBP13.26□□□□□ -0.29
CMTM1-211ENST00000528484 AAASQ9NRG9 546 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 PLAGL2Q9UPG8 496 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
CMTM1-211ENST00000528484 SUPT16HQ9Y5B9 1047 aaKnown RBP13.26□□□□□ -0.29
CMTM1-211ENST00000528484 ZNF318Q5VUA4 2279 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 TMEM221A6NGB7 291 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 M0R296 226 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 DDAH1O94760 285 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 EYA4O95677 639 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 SMARCA1P28370 1054 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 CD52P31358 61 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 PAN2Q504Q3 1202 aaKnown RBP13.25□□□□□ -0.29
CMTM1-211ENST00000528484 ODR4Q5SWX8 454 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 NFXL1Q6ZNB6 911 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 BMP8AQ7Z5Y6 402 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 EFHBQ8N7U6 833 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 MICAL1Q8TDZ2 1067 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 POF1BQ8WVV4 589 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 PSTPIP2Q9H939 334 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 PCDHB12Q9Y5F1 795 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 TRPV2Q9Y5S1 764 aa13.25□□□□□ -0.29
CMTM1-211ENST00000528484 MRPL42Q9Y6G3 142 aaKnown RBP13.25□□□□□ -0.29
CMTM1-211ENST00000528484 ATG2AQ2TAZ0 1938 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 MBLAC1A4D2B0 266 aaPredicted RBP13.24□□□□□ -0.29
CMTM1-211ENST00000528484 LINC01565O15544 149 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 CYP21A2P08686 494 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 SCG2P13521 617 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 KCNA2P16389 499 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 IBSPP21815 317 aaPredicted RBP13.24□□□□□ -0.29
CMTM1-211ENST00000528484 GTF2F1P35269 517 aaKnown RBP eCLIP13.24□□□□□ -0.29
CMTM1-211ENST00000528484 NRIP1P48552 1158 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 COASYQ13057 564 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 SLC35G1Q2M3R5 365 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 TRIM67Q6ZTA4 783 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 KLHL23Q8NBE8 558 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 SMRP1Q8NCR6 262 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 SDF4Q9BRK5 362 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 IRF2BPLQ9H1B7 796 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 TLE6Q9H808 572 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 JPH1Q9HDC5 661 aaPredicted RBP13.24□□□□□ -0.29
CMTM1-211ENST00000528484 PKD2L1Q9P0L9 805 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 PCDHB7Q9Y5E2 793 aa13.24□□□□□ -0.29
CMTM1-211ENST00000528484 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 E7EWF7 191 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 RBAK-RBAKDNI3L0D1 243 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 MEIS2O14770 477 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 ITGB1P05556 798 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 LINC00271P0C7V0 271 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 INSRRP14616 1297 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 UBE3AQ05086 875 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 RBM23Q86U06 439 aaKnown RBP13.23□□□□□ -0.29
CMTM1-211ENST00000528484 ZNF654Q8IZM8 581 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 TMTC2Q8N394 836 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 NME8Q8N427 588 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 SPPL3Q8TCT6 385 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 MSLNLQ96KJ4 702 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 CDCA3Q99618 268 aaPredicted RBP13.23□□□□□ -0.29
CMTM1-211ENST00000528484 PHF7Q9BWX1 381 aaPredicted RBP13.23□□□□□ -0.29
CMTM1-211ENST00000528484 SLC9A2Q9UBY0 812 aa13.23□□□□□ -0.29
CMTM1-211ENST00000528484 PADI3Q9ULW8 664 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms