RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 SETQ01105 290 aaPredicted RBP17.64■□□□□ 0.41
CAPN1-213ENST00000527897 TCTN1Q2MV58 587 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 PPP2R2DQ66LE6 453 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 RUFY4Q6ZNE9 571 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 TMCO2Q7Z6W1 182 aaPredicted RBP17.64■□□□□ 0.41
CAPN1-213ENST00000527897 NECAB1Q8N987 351 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 CRYGNQ8WXF5 182 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 ZBTB10Q96DT7 871 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 PRDM12Q9H4Q4 367 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 TUBE1Q9UJT0 475 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 PCDHA4Q9UN74 947 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 KCNJ14Q9UNX9 436 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 PCDHA11Q9Y5I1 949 aa17.64■□□□□ 0.41
CAPN1-213ENST00000527897 LGR5O75473 907 aa17.63■□□□□ 0.41
CAPN1-213ENST00000527897 CCNE2O96020 404 aa17.63■□□□□ 0.41
CAPN1-213ENST00000527897 INSRRP14616 1297 aa17.63■□□□□ 0.41
CAPN1-213ENST00000527897 WDR5P61964 334 aaKnown RBP17.63■□□□□ 0.41
CAPN1-213ENST00000527897 ADAM17P78536 824 aa17.63■□□□□ 0.41
CAPN1-213ENST00000527897 DEFB103AP81534 67 aa17.63■□□□□ 0.41
CAPN1-213ENST00000527897 IKBKEQ14164 716 aa17.63■□□□□ 0.41
CAPN1-213ENST00000527897 FAM117BQ6P1L5 589 aa17.63■□□□□ 0.41
CAPN1-213ENST00000527897 TRMT1LQ7Z2T5 733 aaKnown RBP17.63■□□□□ 0.41
CAPN1-213ENST00000527897 HERC6Q8IVU3 1022 aa17.63■□□□□ 0.41
CAPN1-213ENST00000527897 BLIDQ8IZY5 108 aa17.63■□□□□ 0.41
CAPN1-213ENST00000527897 TBCKQ8TEA7 893 aa17.63■□□□□ 0.41
CAPN1-213ENST00000527897 ZBED2Q9BTP6 218 aa17.63■□□□□ 0.41
CAPN1-213ENST00000527897 CHD7Q9P2D1 2997 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 KIF28PB7ZC32 967 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 CA3P07451 260 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 PLCB4Q15147 1175 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 FAM160B1Q5W0V3 765 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 MIS18BP1Q6P0N0 1132 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 RSPH3Q86UC2 560 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 CKAP2LQ8IYA6 745 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 DBF4BQ8NFT6 615 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 MAFAQ8NHW3 353 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-213ENST00000527897 PHOSPHO2Q8TCD6 241 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 TRAPPC12Q8WVT3 735 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 DNAJB3Q8WWF6 145 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 GAS2L1Q99501 681 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-213ENST00000527897 FAM49AQ9H0Q0 323 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-213ENST00000527897 SAMM50Q9Y512 469 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 PTPRSQ13332 1948 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 PRUNE2Q8WUY3 3088 aa17.62■□□□□ 0.41
CAPN1-213ENST00000527897 ABHD14A-ACY1A0A1B0GW23 586 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 POTEB3A0JP26 581 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 DHX15O43143 795 aaKnown RBP17.61■□□□□ 0.41
CAPN1-213ENST00000527897 TLL1O43897 1013 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 CAND2O75155 1236 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 LARGE1O95461 756 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 XBP1P17861 261 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 SWSAP1Q6NVH7 229 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 TAF2Q6P1X5 1199 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 PDXDC2PQ6P474 469 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 POTEBQ6S5H4 581 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 ABHD15Q6UXT9 468 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 PLPPR4Q7Z2D5 763 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 CCDC60Q8IWA6 550 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-213ENST00000527897 SEPT8Q92599 483 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 TNPO1Q92973 898 aaKnown RBP17.61■□□□□ 0.41
CAPN1-213ENST00000527897 C22orf23Q9BZE7 217 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 OSBPL7Q9BZF2 842 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 CERS4Q9HA82 394 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 ZNF302Q9NR11 478 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 GJB4Q9NTQ9 266 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 TBC1D22BQ9NU19 505 aa17.61■□□□□ 0.41
CAPN1-213ENST00000527897 ORC3Q9UBD5 711 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-213ENST00000527897 RRN3P2A6NIE6 340 aa17.6■□□□□ 0.41
CAPN1-213ENST00000527897 CHMP2AO43633 222 aa17.6■□□□□ 0.41
CAPN1-213ENST00000527897 ATG7O95352 703 aa17.6■□□□□ 0.41
CAPN1-213ENST00000527897 IGFBP4P22692 258 aa17.6■□□□□ 0.41
CAPN1-213ENST00000527897 CIITAP33076 1130 aa17.6■□□□□ 0.41
CAPN1-213ENST00000527897 FOSBP53539 338 aa17.6■□□□□ 0.41
CAPN1-213ENST00000527897 ME3Q16798 604 aa17.6■□□□□ 0.41
CAPN1-213ENST00000527897 MARCH8Q5T0T0 291 aa17.6■□□□□ 0.41
CAPN1-213ENST00000527897 PPM1EQ8WY54 764 aa17.6■□□□□ 0.41
CAPN1-213ENST00000527897 STK36Q9NRP7 1315 aa17.6■□□□□ 0.41
CAPN1-213ENST00000527897 MYH9P35579 1960 aaKnown RBP17.6■□□□□ 0.41
CAPN1-213ENST00000527897 MICAL3Q7RTP6 2002 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 MSH4O15457 936 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 EFCAB14O75071 495 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 CTDNEP1O95476 244 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 TDP2O95551 362 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 GHRP10912 638 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 USP11P51784 963 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 KRT76Q01546 638 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 TMEM62Q0P6H9 643 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 NONOQ15233 471 aaKnown RBP eCLIP17.59■□□□□ 0.41
CAPN1-213ENST00000527897 INF2Q27J81 1249 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 PLEKHG4Q58EX7 1191 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 GALNT17Q6IS24 598 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 ZNF746Q6NUN9 644 aaPredicted RBP17.59■□□□□ 0.41
CAPN1-213ENST00000527897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.59■□□□□ 0.41
CAPN1-213ENST00000527897 MYOCDQ8IZQ8 938 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 DAGLBQ8NCG7 672 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 GJA10Q969M2 543 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 LENG9Q96B70 501 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 A0A0C4DFX4 3053 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 UNC80Q8N2C7 3258 aa17.59■□□□□ 0.41
CAPN1-213ENST00000527897 CCDC194A0A1B0GVG4 234 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms