RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 DUSP10Q9Y6W6 482 aa16.92■□□□□ 0.3
USH1C-207ENST00000527720 MACROD2A1Z1Q3 448 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 MEIS1O00470 390 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 RHOXF2BP0C7M4 288 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 NR2F2P24468 414 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 PPP2R5CQ13362 524 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 HDXQ7Z353 690 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 SFR1Q86XK3 245 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 CCDC155Q8N6L0 562 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 NOA1Q8NC60 698 aaKnown RBP16.91■□□□□ 0.3
USH1C-207ENST00000527720 ACER1Q8TDN7 264 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 RHOXF2Q9BQY4 288 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 LSM14BQ9BX40 385 aaKnown RBP16.91■□□□□ 0.3
USH1C-207ENST00000527720 VCPKMTQ9H867 229 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 OLFML3Q9NRN5 406 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
USH1C-207ENST00000527720 EPS15P42566 896 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 MAGEA1P43355 309 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 USP14P54578 494 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 KIAA1755Q5JYT7 1200 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 FAM83AQ86UY5 434 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 RNF10Q8N5U6 811 aaKnown RBP16.91■□□□□ 0.3
USH1C-207ENST00000527720 HSD17B14Q9BPX1 270 aa16.91■□□□□ 0.3
USH1C-207ENST00000527720 TYW1Q9NV66 732 aaKnown RBP16.91■□□□□ 0.3
USH1C-207ENST00000527720 CLRN2A0PK11 232 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 TBCAO75347 108 aaKnown RBP16.9■□□□□ 0.3
USH1C-207ENST00000527720 PSMD10O75832 226 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
USH1C-207ENST00000527720 CASP5P51878 434 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 SMC1AQ14683 1233 aaKnown RBP16.9■□□□□ 0.3
USH1C-207ENST00000527720 OTOP1Q7RTM1 612 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 CYP2W1Q8TAV3 490 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 SLC5A5Q92911 643 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 MMS19Q96T76 1030 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 BHMT2Q9H2M3 363 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 SNX12Q9UMY4 172 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 SLC16A3O15427 465 aaKnown RBP16.9■□□□□ 0.3
USH1C-207ENST00000527720 CFBP00751 764 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 ERCC3P19447 782 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 VSNL1P62760 191 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 ITIH3Q06033 890 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 KCNH2Q12809 1159 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 LARGE2Q8N3Y3 721 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 DEFB129Q9H1M3 183 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 METTL14Q9HCE5 456 aaKnown RBP16.9■□□□□ 0.3
USH1C-207ENST00000527720 NLRC4Q9NPP4 1024 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 PLCB1Q9NQ66 1216 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 AIPL1Q9NZN9 384 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 ARMCX3Q9UH62 379 aaPredicted RBP16.9■□□□□ 0.3
USH1C-207ENST00000527720 FEM1BQ9UK73 627 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 L1RE1Q9UN81 338 aa16.9■□□□□ 0.3
USH1C-207ENST00000527720 EML1O00423 815 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 POLR2FP61218 127 aaKnown RBP16.89■□□□□ 0.29
USH1C-207ENST00000527720 SETQ01105 290 aaPredicted RBP16.89■□□□□ 0.29
USH1C-207ENST00000527720 GPS2Q13227 327 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 TDRD12Q587J7 1177 aaKnown RBP16.89■□□□□ 0.29
USH1C-207ENST00000527720 LRCH2Q5VUJ6 765 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 ZNF572Q7Z3I7 529 aaPredicted RBP16.89■□□□□ 0.29
USH1C-207ENST00000527720 AGBL3Q8NEM8 1001 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 CAMKK2Q96RR4 588 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 WDR18Q9BV38 432 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 JADE2Q9NQC1 790 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 ST7Q9NRC1 585 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 EIF3DO15371 548 aaKnown RBP eCLIP16.89■□□□□ 0.29
USH1C-207ENST00000527720 SRGAP2O75044 1071 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 RAD17O75943 681 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 TAL1P17542 331 aaPredicted RBP16.89■□□□□ 0.29
USH1C-207ENST00000527720 HOXD13P35453 343 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 CYP4A11Q02928 519 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 RINT1Q6NUQ1 792 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 RUSC1Q9BVN2 902 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 GANQ9H2C0 597 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 ABCB6Q9NP58 842 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 PRDM4Q9UKN5 801 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 CAPN6Q9Y6Q1 641 aa16.89■□□□□ 0.29
USH1C-207ENST00000527720 COL4A5P29400 1685 aa16.88■□□□□ 0.29
USH1C-207ENST00000527720 TLR2O60603 784 aa16.88■□□□□ 0.29
USH1C-207ENST00000527720 AFPP02771 609 aaKnown RBP16.88■□□□□ 0.29
USH1C-207ENST00000527720 TCP1P17987 556 aaKnown RBP16.88■□□□□ 0.29
USH1C-207ENST00000527720 CAP2P40123 477 aa16.88■□□□□ 0.29
USH1C-207ENST00000527720 PRELPP51888 382 aa16.88■□□□□ 0.29
USH1C-207ENST00000527720 NFIL3Q16649 462 aa16.88■□□□□ 0.29
USH1C-207ENST00000527720 CAGE1Q8TC20 777 aa16.88■□□□□ 0.29
USH1C-207ENST00000527720 WDR11Q9BZH6 1224 aa16.88■□□□□ 0.29
USH1C-207ENST00000527720 KCND2Q9NZV8 630 aa16.88■□□□□ 0.29
USH1C-207ENST00000527720 EIF3JO75822 258 aaKnown RBP16.87■□□□□ 0.29
USH1C-207ENST00000527720 SLITRK3O94933 977 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 MYBP10242 640 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 MAP3K10Q02779 954 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 GFPT1Q06210 699 aaPredicted RBP16.87■□□□□ 0.29
USH1C-207ENST00000527720 EZH2Q15910 746 aaKnown RBP16.87■□□□□ 0.29
USH1C-207ENST00000527720 CEP55Q53EZ4 464 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 CCDC174Q6PII3 467 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 RGL1Q9NZL6 768 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 SEL1LQ9UBV2 794 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 TSKSQ9UJT2 592 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 UBE4BO95155 1302 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 PRPF6O94906 941 aaKnown RBP16.87■□□□□ 0.29
USH1C-207ENST00000527720 MOCS3O95396 460 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 XRCC5P13010 732 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms