RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 IL23AQ9NPF7 189 aa12.7□□□□□ -0.38
CTSB-214ENST00000527243 SETD4Q9NVD3 440 aa12.7□□□□□ -0.38
CTSB-214ENST00000527243 NRCAMQ92823 1304 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 DDX39AO00148 427 aaKnown RBP12.69□□□□□ -0.38
CTSB-214ENST00000527243 WNT7AO00755 349 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 TREHO43280 583 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 ATP4AP20648 1035 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 STAT5BP51692 787 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 BFSP2Q13515 415 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 PLCB4Q15147 1175 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 LETM2Q2VYF4 491 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 MARCH8Q5T0T0 291 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 SMAP1Q8IYB5 467 aaPredicted RBP12.69□□□□□ -0.38
CTSB-214ENST00000527243 GLG1Q92896 1179 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 GJA10Q969M2 543 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 SNX21Q969T3 373 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 SCLYQ96I15 445 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 C8orf76Q96K31 380 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 BRMS1Q9HCU9 246 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 DDX25Q9UHL0 483 aaKnown RBP12.69□□□□□ -0.38
CTSB-214ENST00000527243 NOD1Q9Y239 953 aa12.69□□□□□ -0.38
CTSB-214ENST00000527243 MAFBQ9Y5Q3 323 aaPredicted RBP12.69□□□□□ -0.38
CTSB-214ENST00000527243 LAMA2P24043 3122 aaKnown RBP12.68□□□□□ -0.38
CTSB-214ENST00000527243 ACRP10323 421 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 CKBP12277 381 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 SELPP16109 830 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 MARK3P27448 753 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 RFC2P35250 354 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 SLC26A2P50443 739 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 FOSBP53539 338 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 GUCY1B3Q02153 619 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 PPFIA1Q13136 1202 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 NBR1Q14596 966 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 MBTPS1Q14703 1052 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 LRCH2Q5VUJ6 765 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 PSRC1Q6PGN9 363 aaPredicted RBP12.68□□□□□ -0.38
CTSB-214ENST00000527243 ZNF365Q70YC5 407 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 RPAINQ86UA6 219 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 HERVK_113Q902F9 699 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 HAS1Q92839 578 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 ATP6V0A1Q93050 837 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 UNC45AQ9H3U1 944 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 AZI2Q9H6S1 392 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 PCDHA10Q9Y5I2 948 aa12.68□□□□□ -0.38
CTSB-214ENST00000527243 IGSF9BQ9UPX0 1349 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 TRIP12Q14669 1992 aaPredicted RBP12.67□□□□□ -0.38
CTSB-214ENST00000527243 SZT2Q5T011 3432 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 WDR64B1ANS9 1081 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 ZBTB42B2RXF5 422 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 TBX3O15119 743 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 ZNF862O60290 1169 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 GAS7O60861 476 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 CAND2O75155 1236 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 CXCL10P02778 98 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 PFKMP08237 780 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 GNAT1P11488 350 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 INSRRP14616 1297 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 CUL4AQ13619 759 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 TRIM29Q14134 588 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 GRIK4Q16099 956 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 ZNF618Q5T7W0 954 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 SWSAP1Q6NVH7 229 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 MIS18BP1Q6P0N0 1132 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 LRRC8DQ7L1W4 858 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 CCDC155Q8N6L0 562 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 RDM1Q8NG50 284 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 ATP8B4Q8TF62 1192 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 FAM20AQ96MK3 541 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 NAP1L4Q99733 375 aaKnown RBP12.67□□□□□ -0.38
CTSB-214ENST00000527243 TEKT3Q9BXF9 490 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
CTSB-214ENST00000527243 DISC1Q9NRI5 854 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 VAV3Q9UKW4 847 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 TET1Q8NFU7 2136 aa12.67□□□□□ -0.38
CTSB-214ENST00000527243 POTEB3A0JP26 581 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 RRN3P2A6NIE6 340 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 KIF28PB7ZC32 967 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 HBP1O60381 514 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 CCNT1O60563 726 aaKnown RBP12.66□□□□□ -0.38
CTSB-214ENST00000527243 NBNO60934 754 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 PARNO95453 639 aaKnown RBP12.66□□□□□ -0.38
CTSB-214ENST00000527243 PSAPP07602 524 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 U2AF2P26368 475 aaKnown RBP eCLIP12.66□□□□□ -0.38
CTSB-214ENST00000527243 JAK3P52333 1124 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 SPIRE1Q08AE8 756 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 PPP2R5CQ13362 524 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 FAM26DQ5JW98 314 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 FAM160B1Q5W0V3 765 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 PDXDC2PQ6P474 469 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 POTEBQ6S5H4 581 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 RUFY4Q6ZNE9 571 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 POTEDQ86YR6 584 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 RPUSD2Q8IZ73 545 aaKnown RBP12.66□□□□□ -0.38
CTSB-214ENST00000527243 RNPC3Q96LT9 517 aaKnown RBP12.66□□□□□ -0.38
CTSB-214ENST00000527243 ZNF302Q9NR11 478 aa12.66□□□□□ -0.38
CTSB-214ENST00000527243 CXXC1Q9P0U4 656 aaPredicted RBP12.66□□□□□ -0.38
CTSB-214ENST00000527243 TANC1Q9C0D5 1861 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms