RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 HIPK3Q9H422 1215 aa19.49■□□□□ 0.71
LMX1B-203ENST00000526117 RNPEPQ9H4A4 650 aa19.49■□□□□ 0.71
LMX1B-203ENST00000526117 DISC1Q9NRI5 854 aa19.49■□□□□ 0.71
LMX1B-203ENST00000526117 VAV3Q9UKW4 847 aa19.49■□□□□ 0.71
LMX1B-203ENST00000526117 IGSF9BQ9UPX0 1349 aa19.49■□□□□ 0.71
LMX1B-203ENST00000526117 CEP290O15078 2479 aa19.48■□□□□ 0.71
LMX1B-203ENST00000526117 H3BQV1 296 aa19.48■□□□□ 0.71
LMX1B-203ENST00000526117 NEMFO60524 1076 aa19.48■□□□□ 0.71
LMX1B-203ENST00000526117 BAG4O95429 457 aaKnown RBP19.48■□□□□ 0.71
LMX1B-203ENST00000526117 ITGB8P26012 769 aa19.48■□□□□ 0.71
LMX1B-203ENST00000526117 SERINC5Q86VE9 423 aa19.48■□□□□ 0.71
LMX1B-203ENST00000526117 CCDC60Q8IWA6 550 aaPredicted RBP19.48■□□□□ 0.71
LMX1B-203ENST00000526117 CCDC155Q8N6L0 562 aa19.48■□□□□ 0.71
LMX1B-203ENST00000526117 MTMR9Q96QG7 549 aa19.48■□□□□ 0.71
LMX1B-203ENST00000526117 ZNF302Q9NR11 478 aa19.48■□□□□ 0.71
LMX1B-203ENST00000526117 NOL7Q9UMY1 257 aaKnown RBP19.48■□□□□ 0.71
LMX1B-203ENST00000526117 RANBP2P49792 3224 aaKnown RBP19.48■□□□□ 0.71
LMX1B-203ENST00000526117 MBLAC1A4D2B0 266 aaPredicted RBP19.47■□□□□ 0.71
LMX1B-203ENST00000526117 RRN3P2A6NIE6 340 aa19.47■□□□□ 0.71
LMX1B-203ENST00000526117 WNT7AO00755 349 aa19.47■□□□□ 0.71
LMX1B-203ENST00000526117 CAND2O75155 1236 aa19.47■□□□□ 0.71
LMX1B-203ENST00000526117 BFSP2Q13515 415 aa19.47■□□□□ 0.71
LMX1B-203ENST00000526117 HIC1Q14526 733 aa19.47■□□□□ 0.71
LMX1B-203ENST00000526117 NOD1Q9Y239 953 aa19.47■□□□□ 0.71
LMX1B-203ENST00000526117 TANC1Q9C0D5 1861 aa19.47■□□□□ 0.71
LMX1B-203ENST00000526117 COL1A2P08123 1366 aa19.46■□□□□ 0.71
LMX1B-203ENST00000526117 RPLP2P05387 115 aaKnown RBP19.46■□□□□ 0.71
LMX1B-203ENST00000526117 PDIA4P13667 645 aaKnown RBP19.46■□□□□ 0.71
LMX1B-203ENST00000526117 SPIRE1Q08AE8 756 aa19.46■□□□□ 0.71
LMX1B-203ENST00000526117 PLCB4Q15147 1175 aa19.46■□□□□ 0.71
LMX1B-203ENST00000526117 CALCRLQ16602 461 aa19.46■□□□□ 0.71
LMX1B-203ENST00000526117 SWSAP1Q6NVH7 229 aa19.46■□□□□ 0.71
LMX1B-203ENST00000526117 PDXDC2PQ6P474 469 aa19.46■□□□□ 0.71
LMX1B-203ENST00000526117 RPAINQ86UA6 219 aa19.46■□□□□ 0.71
LMX1B-203ENST00000526117 ATP8B4Q8TF62 1192 aa19.46■□□□□ 0.71
LMX1B-203ENST00000526117 LMBR1Q8WVP7 490 aa19.46■□□□□ 0.71
LMX1B-203ENST00000526117 BADQ92934 168 aa19.46■□□□□ 0.71
LMX1B-203ENST00000526117 FAM167AQ96KS9 214 aa19.46■□□□□ 0.71
LMX1B-203ENST00000526117 POTEB3A0JP26 581 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 BACH1O14867 736 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 HBP1O60381 514 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 PARNO95453 639 aaKnown RBP19.45■□□□□ 0.7
LMX1B-203ENST00000526117 CYP2C9P11712 490 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 RFC2P35250 354 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 CHMP4BP1P59074 171 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 PPFIA1Q13136 1202 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 GRIK4Q16099 956 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 TRIM71Q2Q1W2 868 aaKnown RBP19.45■□□□□ 0.7
LMX1B-203ENST00000526117 RILPL1Q5EBL4 403 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 TTC38Q5R3I4 469 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 POTEBQ6S5H4 581 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 MIER3Q7Z3K6 550 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 BRAPQ7Z569 592 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 TMEM199Q8N511 208 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 BBXQ8WY36 941 aaPredicted RBP19.45■□□□□ 0.7
LMX1B-203ENST00000526117 DHX38Q92620 1227 aaKnown RBP19.45■□□□□ 0.7
LMX1B-203ENST00000526117 ATP6V0A1Q93050 837 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 WNT8AQ9H1J5 351 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 SAMM50Q9Y512 469 aa19.45■□□□□ 0.7
LMX1B-203ENST00000526117 ATP4AP20648 1035 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 MARK3P27448 753 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 TOB1P50616 345 aaPredicted RBP19.44■□□□□ 0.7
LMX1B-203ENST00000526117 MDM2Q00987 491 aaPredicted RBP19.44■□□□□ 0.7
LMX1B-203ENST00000526117 FPGSQ05932 587 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 PPIGQ13427 754 aaKnown RBP eCLIP19.44■□□□□ 0.7
LMX1B-203ENST00000526117 MARCH8Q5T0T0 291 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 TAF2Q6P1X5 1199 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 CHRDL2Q6WN34 429 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 PPP1R13LQ8WUF5 828 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 GJA10Q969M2 543 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 UIMC1Q96RL1 719 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 SETD4Q9NVD3 440 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 GABBR1Q9UBS5 961 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 PCDHA12Q9UN75 941 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 WDR81Q562E7 1941 aa19.44■□□□□ 0.7
LMX1B-203ENST00000526117 LAD1O00515 517 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 TREHO43280 583 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 CHMP2AO43633 222 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 PFKMP08237 780 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 INSRRP14616 1297 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 MCM7P33993 719 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 ZNF484Q5JVG2 852 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 MCTP1Q6DN14 999 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 PPP1R12CQ9BZL4 782 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 TUBE1Q9UJT0 475 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 CEP131Q9UPN4 1083 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 TRPC6Q9Y210 931 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 UMODL1Q5DID0 1318 aa19.43■□□□□ 0.7
LMX1B-203ENST00000526117 ZNF862O60290 1169 aa19.42■□□□□ 0.7
LMX1B-203ENST00000526117 MARCH6O60337 910 aa19.42■□□□□ 0.7
LMX1B-203ENST00000526117 DKC1O60832 514 aaKnown RBP eCLIP19.42■□□□□ 0.7
LMX1B-203ENST00000526117 P4HBP07237 508 aaKnown RBP19.42■□□□□ 0.7
LMX1B-203ENST00000526117 OR52Z1P0C646 297 aa19.42■□□□□ 0.7
LMX1B-203ENST00000526117 CKBP12277 381 aa19.42■□□□□ 0.7
LMX1B-203ENST00000526117 SYT1P21579 422 aa19.42■□□□□ 0.7
LMX1B-203ENST00000526117 CYP2C18P33260 490 aa19.42■□□□□ 0.7
LMX1B-203ENST00000526117 ZNF200P98182 395 aaPredicted RBP19.42■□□□□ 0.7
LMX1B-203ENST00000526117 EPHA7Q15375 998 aa19.42■□□□□ 0.7
LMX1B-203ENST00000526117 C4orf32Q8N8J7 132 aa19.42■□□□□ 0.7
LMX1B-203ENST00000526117 RETREG2Q8NC44 543 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms