RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ZDHHC9Q9Y397 364 aa23.36■■□□□ 1.33
CD44-222ENST00000526025 SAMM50Q9Y512 469 aa23.36■■□□□ 1.33
CD44-222ENST00000526025 MAFBQ9Y5Q3 323 aaPredicted RBP23.36■■□□□ 1.33
CD44-222ENST00000526025 CHMP2AO43633 222 aa23.35■■□□□ 1.33
CD44-222ENST00000526025 PSMC6P62333 389 aa23.35■■□□□ 1.33
CD44-222ENST00000526025 PDIA5Q14554 519 aa23.35■■□□□ 1.33
CD44-222ENST00000526025 SF3A1Q15459 793 aaKnown RBP23.35■■□□□ 1.33
CD44-222ENST00000526025 NBPF20Q3BBV1 942 aa23.35■■□□□ 1.33
CD44-222ENST00000526025 TRIM50Q86XT4 487 aa23.35■■□□□ 1.33
CD44-222ENST00000526025 NEK9Q8TD19 979 aa23.35■■□□□ 1.33
CD44-222ENST00000526025 RAB34Q9BZG1 259 aa23.35■■□□□ 1.33
CD44-222ENST00000526025 CIZ1Q9ULV3 898 aaPredicted RBP23.35■■□□□ 1.33
CD44-222ENST00000526025 ATP6V1DQ9Y5K8 247 aa23.35■■□□□ 1.33
CD44-222ENST00000526025 EML1O00423 815 aa23.34■■□□□ 1.33
CD44-222ENST00000526025 BACH1O14867 736 aa23.34■■□□□ 1.33
CD44-222ENST00000526025 HOXC8P31273 242 aa23.34■■□□□ 1.33
CD44-222ENST00000526025 SWSAP1Q6NVH7 229 aa23.34■■□□□ 1.33
CD44-222ENST00000526025 ATP6V0A1Q93050 837 aa23.34■■□□□ 1.33
CD44-222ENST00000526025 STK24Q9Y6E0 443 aa23.34■■□□□ 1.33
CD44-222ENST00000526025 MKI67P46013 3256 aaKnown RBP23.33■■□□□ 1.33
CD44-222ENST00000526025 TRIP12Q14669 1992 aaPredicted RBP23.33■■□□□ 1.33
CD44-222ENST00000526025 DKC1O60832 514 aaKnown RBP eCLIP23.33■■□□□ 1.33
CD44-222ENST00000526025 P4HBP07237 508 aaKnown RBP23.33■■□□□ 1.33
CD44-222ENST00000526025 NASPP49321 788 aaPredicted RBP23.33■■□□□ 1.33
CD44-222ENST00000526025 ATN1P54259 1190 aaPredicted RBP23.33■■□□□ 1.33
CD44-222ENST00000526025 PTPAQ15257 358 aa23.33■■□□□ 1.33
CD44-222ENST00000526025 LRRC26Q2I0M4 334 aa23.33■■□□□ 1.33
CD44-222ENST00000526025 PDXDC2PQ6P474 469 aa23.33■■□□□ 1.33
CD44-222ENST00000526025 FAM173BQ6P4H8 233 aa23.33■■□□□ 1.33
CD44-222ENST00000526025 DTHD1Q6ZMT9 781 aa23.33■■□□□ 1.33
CD44-222ENST00000526025 IGSF22Q8N9C0 903 aa23.33■■□□□ 1.33
CD44-222ENST00000526025 FAM167AQ96KS9 214 aa23.33■■□□□ 1.33
CD44-222ENST00000526025 GABBR1Q9UBS5 961 aa23.33■■□□□ 1.33
CD44-222ENST00000526025 TCHHQ07283 1943 aa23.32■■□□□ 1.32
CD44-222ENST00000526025 LOXHD1Q8IVV2 1947 aa23.32■■□□□ 1.32
CD44-222ENST00000526025 RTP1P59025 263 aa23.32■■□□□ 1.32
CD44-222ENST00000526025 NCAPH2Q6IBW4 605 aa23.32■■□□□ 1.32
CD44-222ENST00000526025 C7orf31Q8N865 590 aa23.32■■□□□ 1.32
CD44-222ENST00000526025 ATP8B4Q8TF62 1192 aa23.32■■□□□ 1.32
CD44-222ENST00000526025 USP28Q96RU2 1077 aa23.32■■□□□ 1.32
CD44-222ENST00000526025 GTF2IRD1Q9UHL9 959 aa23.32■■□□□ 1.32
CD44-222ENST00000526025 CLIC4Q9Y696 253 aa23.32■■□□□ 1.32
CD44-222ENST00000526025 DNAH12Q6ZR08 3092 aa23.32■■□□□ 1.32
CD44-222ENST00000526025 TECP42680 631 aa23.31■■□□□ 1.32
CD44-222ENST00000526025 QARSP47897 775 aaKnown RBP23.31■■□□□ 1.32
CD44-222ENST00000526025 PSMC5P62195 406 aa23.31■■□□□ 1.32
CD44-222ENST00000526025 PLCB4Q15147 1175 aa23.31■■□□□ 1.32
CD44-222ENST00000526025 FOXD4L5Q5VV16 416 aaPredicted RBP23.31■■□□□ 1.32
CD44-222ENST00000526025 FAM126BQ8IXS8 530 aa23.31■■□□□ 1.32
CD44-222ENST00000526025 ERMNQ8TAM6 284 aa23.31■■□□□ 1.32
CD44-222ENST00000526025 FOXD4L4Q8WXT5 416 aaPredicted RBP23.31■■□□□ 1.32
CD44-222ENST00000526025 BBXQ8WY36 941 aaPredicted RBP23.31■■□□□ 1.32
CD44-222ENST00000526025 HSD17B14Q9BPX1 270 aa23.31■■□□□ 1.32
CD44-222ENST00000526025 NRCAMQ92823 1304 aa23.31■■□□□ 1.32
CD44-222ENST00000526025 COL1A2P08123 1366 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 POTEMA6NI47 508 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 HBP1O60381 514 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 CAPN15O75808 1086 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 YEATS4O95619 227 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 CD4P01730 458 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 SMIM10L2AP0DMW4 78 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 SMIM10L2BP0DMW5 78 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 MUTP22033 750 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 SLC39A14Q15043 492 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 TRIM60Q495X7 471 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 AK8Q96MA6 479 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 RNPEPQ9H4A4 650 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 HDAC6Q9UBN7 1215 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 CFAP45Q9UL16 551 aa23.3■■□□□ 1.32
CD44-222ENST00000526025 POTEB3A0JP26 581 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 DCDC2CA8MYV0 355 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 TLR3O15455 904 aaKnown RBP23.29■■□□□ 1.32
CD44-222ENST00000526025 ZNF862O60290 1169 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 LYPLA2O95372 231 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 GNAT1P11488 350 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 ATP4AP20648 1035 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 IL17AQ16552 155 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 HAUS3Q68CZ6 603 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 POTEBQ6S5H4 581 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 C4orf19Q8IY42 314 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 EIF2AK1Q9BQI3 630 aaKnown RBP23.29■■□□□ 1.32
CD44-222ENST00000526025 POLR3CQ9BUI4 534 aaPredicted RBP23.29■■□□□ 1.32
CD44-222ENST00000526025 FTOQ9C0B1 505 aaKnown RBP eCLIP23.29■■□□□ 1.32
CD44-222ENST00000526025 TUFT1Q9NNX1 390 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 LRWD1Q9UFC0 647 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 ARID2Q68CP9 1835 aa23.29■■□□□ 1.32
CD44-222ENST00000526025 PDE4DIPQ5VU43 2346 aa23.28■■□□□ 1.32
CD44-222ENST00000526025 RRN3P2A6NIE6 340 aa23.28■■□□□ 1.32
CD44-222ENST00000526025 SLC26A4O43511 780 aa23.28■■□□□ 1.32
CD44-222ENST00000526025 OATP04181 439 aa23.28■■□□□ 1.32
CD44-222ENST00000526025 MARK3P27448 753 aa23.28■■□□□ 1.32
CD44-222ENST00000526025 PRKCEQ02156 737 aa23.28■■□□□ 1.32
CD44-222ENST00000526025 TLE2Q04725 743 aa23.28■■□□□ 1.32
CD44-222ENST00000526025 UGCGQ16739 394 aa23.28■■□□□ 1.32
CD44-222ENST00000526025 FAM47CQ5HY64 1035 aa23.28■■□□□ 1.32
CD44-222ENST00000526025 LINC00301Q8NCQ3 95 aa23.28■■□□□ 1.32
CD44-222ENST00000526025 IPO9Q96P70 1041 aaKnown RBP23.28■■□□□ 1.32
CD44-222ENST00000526025 LXNQ9BS40 222 aa23.28■■□□□ 1.32
CD44-222ENST00000526025 ZSWIM4Q9H7M6 989 aa23.28■■□□□ 1.32
CD44-222ENST00000526025 TRPC6Q9Y210 931 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms