RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 RB1P06400 928 aa27.48■■□□□ 1.99
USP47-205ENST00000525257 MCM5P33992 734 aa27.48■■□□□ 1.99
USP47-205ENST00000525257 MTA3Q9BTC8 594 aa27.48■■□□□ 1.99
USP47-205ENST00000525257 SMARCAD1Q9H4L7 1026 aa27.48■■□□□ 1.99
USP47-205ENST00000525257 FAM50BQ9Y247 325 aa27.48■■□□□ 1.99
USP47-205ENST00000525257 RWDD3Q9Y3V2 267 aa27.48■■□□□ 1.99
USP47-205ENST00000525257 MUC6Q6W4X9 2439 aa27.47■■□□□ 1.99
USP47-205ENST00000525257 MBLAC1A4D2B0 266 aaPredicted RBP27.47■■□□□ 1.99
USP47-205ENST00000525257 SPDYE3A6NKU9 549 aa27.47■■□□□ 1.99
USP47-205ENST00000525257 ALADP13716 330 aa27.47■■□□□ 1.99
USP47-205ENST00000525257 BTG3Q14201 252 aaPredicted RBP27.47■■□□□ 1.99
USP47-205ENST00000525257 CCDC82Q8N4S0 544 aa27.47■■□□□ 1.99
USP47-205ENST00000525257 TMEM87BQ96K49 555 aa27.47■■□□□ 1.99
USP47-205ENST00000525257 FAM49AQ9H0Q0 323 aaPredicted RBP27.47■■□□□ 1.99
USP47-205ENST00000525257 LMAN2LQ9H0V9 348 aa27.47■■□□□ 1.99
USP47-205ENST00000525257 TTC3P53804 2025 aa27.46■■□□□ 1.99
USP47-205ENST00000525257 MRPS6P82932 125 aaKnown RBP27.46■■□□□ 1.99
USP47-205ENST00000525257 ZP2Q05996 745 aa27.46■■□□□ 1.99
USP47-205ENST00000525257 TSHZ1Q6ZSZ6 1077 aa27.46■■□□□ 1.99
USP47-205ENST00000525257 TMTC2Q8N394 836 aa27.46■■□□□ 1.99
USP47-205ENST00000525257 UIMC1Q96RL1 719 aa27.46■■□□□ 1.99
USP47-205ENST00000525257 PCDHA6Q9UN73 950 aa27.46■■□□□ 1.99
USP47-205ENST00000525257 PCDHA8Q9Y5H6 950 aa27.46■■□□□ 1.99
USP47-205ENST00000525257 C5orf42Q9H799 3197 aa27.45■■□□□ 1.99
USP47-205ENST00000525257 CALM1P0DP23 149 aa27.45■■□□□ 1.98
USP47-205ENST00000525257 CALM2P0DP24 149 aa27.45■■□□□ 1.98
USP47-205ENST00000525257 CALM3P0DP25 149 aa27.45■■□□□ 1.98
USP47-205ENST00000525257 CD52P31358 61 aa27.45■■□□□ 1.98
USP47-205ENST00000525257 LTBRP36941 435 aa27.45■■□□□ 1.98
USP47-205ENST00000525257 HYAL1Q12794 435 aa27.45■■□□□ 1.98
USP47-205ENST00000525257 CLUL1Q15846 466 aa27.45■■□□□ 1.98
USP47-205ENST00000525257 LINC01599Q8WXQ3 324 aa27.45■■□□□ 1.98
USP47-205ENST00000525257 CLP1Q92989 425 aaKnown RBP27.45■■□□□ 1.98
USP47-205ENST00000525257 ZNF689Q96CS4 500 aaPredicted RBP27.45■■□□□ 1.98
USP47-205ENST00000525257 AGO3Q9H9G7 860 aaKnown RBP27.45■■□□□ 1.98
USP47-205ENST00000525257 JADE2Q9NQC1 790 aa27.45■■□□□ 1.98
USP47-205ENST00000525257 INSRRP14616 1297 aa27.44■■□□□ 1.98
USP47-205ENST00000525257 HEATR3Q7Z4Q2 680 aa27.44■■□□□ 1.98
USP47-205ENST00000525257 PCYT2Q99447 389 aa27.44■■□□□ 1.98
USP47-205ENST00000525257 LRRC2Q9BYS8 371 aa27.44■■□□□ 1.98
USP47-205ENST00000525257 JPH1Q9HDC5 661 aaPredicted RBP27.44■■□□□ 1.98
USP47-205ENST00000525257 PRKAG3Q9UGI9 489 aa27.44■■□□□ 1.98
USP47-205ENST00000525257 SLC12A7Q9Y666 1083 aa27.44■■□□□ 1.98
USP47-205ENST00000525257 DCXO43602 365 aa27.43■■□□□ 1.98
USP47-205ENST00000525257 NCK2O43639 380 aa27.43■■□□□ 1.98
USP47-205ENST00000525257 DGKIO75912 1065 aa27.43■■□□□ 1.98
USP47-205ENST00000525257 LIFRP42702 1097 aa27.43■■□□□ 1.98
USP47-205ENST00000525257 DLX2Q07687 328 aaPredicted RBP27.43■■□□□ 1.98
USP47-205ENST00000525257 CSPP1Q1MSJ5 1256 aa27.43■■□□□ 1.98
USP47-205ENST00000525257 CTC1Q2NKJ3 1217 aa27.43■■□□□ 1.98
USP47-205ENST00000525257 TMTC3Q6ZXV5 915 aa27.43■■□□□ 1.98
USP47-205ENST00000525257 LSG1Q9H089 658 aaKnown RBP27.43■■□□□ 1.98
USP47-205ENST00000525257 ALG13Q9NP73 1137 aaKnown RBP27.43■■□□□ 1.98
USP47-205ENST00000525257 TRPC6Q9Y210 931 aa27.43■■□□□ 1.98
USP47-205ENST00000525257 KIAA1671Q9BY89 1806 aa27.43■■□□□ 1.98
USP47-205ENST00000525257 POTEB3A0JP26 581 aa27.42■■□□□ 1.98
USP47-205ENST00000525257 RRN3P2A6NIE6 340 aa27.42■■□□□ 1.98
USP47-205ENST00000525257 SLC27A2O14975 620 aa27.42■■□□□ 1.98
USP47-205ENST00000525257 TMEM62Q0P6H9 643 aa27.42■■□□□ 1.98
USP47-205ENST00000525257 POTEBQ6S5H4 581 aa27.42■■□□□ 1.98
USP47-205ENST00000525257 ADHFE1Q8IWW8 467 aa27.42■■□□□ 1.98
USP47-205ENST00000525257 IGFLR1Q9H665 355 aa27.42■■□□□ 1.98
USP47-205ENST00000525257 AZI2Q9H6S1 392 aa27.42■■□□□ 1.98
USP47-205ENST00000525257 SLC9A2Q9UBY0 812 aa27.42■■□□□ 1.98
USP47-205ENST00000525257 LOXHD1Q8IVV2 1947 aa27.41■■□□□ 1.98
USP47-205ENST00000525257 MAFGO15525 162 aa27.41■■□□□ 1.98
USP47-205ENST00000525257 MMP1P03956 469 aa27.41■■□□□ 1.98
USP47-205ENST00000525257 GTF2F1P35269 517 aaKnown RBP eCLIP27.41■■□□□ 1.98
USP47-205ENST00000525257 IER5Q5VY09 327 aa27.41■■□□□ 1.98
USP47-205ENST00000525257 MICU3Q86XE3 530 aa27.41■■□□□ 1.98
USP47-205ENST00000525257 FANCBQ8NB91 859 aa27.41■■□□□ 1.98
USP47-205ENST00000525257 TRAPPC12Q8WVT3 735 aa27.41■■□□□ 1.98
USP47-205ENST00000525257 KCNH7Q9NS40 1196 aa27.41■■□□□ 1.98
USP47-205ENST00000525257 TRPV2Q9Y5S1 764 aa27.41■■□□□ 1.98
USP47-205ENST00000525257 MRPL42Q9Y6G3 142 aaKnown RBP27.41■■□□□ 1.98
USP47-205ENST00000525257 C19orf67A6NJJ6 358 aa27.4■■□□□ 1.98
USP47-205ENST00000525257 RPLP2P05387 115 aaKnown RBP27.4■■□□□ 1.98
USP47-205ENST00000525257 IRX6P78412 446 aaPredicted RBP27.4■■□□□ 1.98
USP47-205ENST00000525257 RTN4RL1Q86UN2 441 aaPredicted RBP27.4■■□□□ 1.98
USP47-205ENST00000525257 CYP2W1Q8TAV3 490 aa27.4■■□□□ 1.98
USP47-205ENST00000525257 MXRA8Q9BRK3 442 aa27.4■■□□□ 1.98
USP47-205ENST00000525257 PLVAPQ9BX97 442 aa27.4■■□□□ 1.98
USP47-205ENST00000525257 M0QZ92 97 aa27.39■■□□□ 1.98
USP47-205ENST00000525257 LINC01565O15544 149 aa27.39■■□□□ 1.98
USP47-205ENST00000525257 TBX10O75333 385 aa27.39■■□□□ 1.98
USP47-205ENST00000525257 PLCB4Q15147 1175 aa27.39■■□□□ 1.98
USP47-205ENST00000525257 PAN2Q504Q3 1202 aaKnown RBP27.39■■□□□ 1.98
USP47-205ENST00000525257 CREB3L3Q68CJ9 461 aa27.39■■□□□ 1.98
USP47-205ENST00000525257 NPAS4Q8IUM7 802 aa27.39■■□□□ 1.98
USP47-205ENST00000525257 PGBD1Q96JS3 809 aa27.39■■□□□ 1.98
USP47-205ENST00000525257 SDF4Q9BRK5 362 aa27.39■■□□□ 1.98
USP47-205ENST00000525257 FTHL17Q9BXU8 183 aa27.39■■□□□ 1.98
USP47-205ENST00000525257 PADI3Q9ULW8 664 aa27.39■■□□□ 1.98
USP47-205ENST00000525257 PLAGL2Q9UPG8 496 aa27.39■■□□□ 1.98
USP47-205ENST00000525257 PIEZO1Q92508 2521 aa27.38■■□□□ 1.97
USP47-205ENST00000525257 MBTPS2O43462 519 aa27.38■■□□□ 1.97
USP47-205ENST00000525257 IRS1P35568 1242 aa27.38■■□□□ 1.97
USP47-205ENST00000525257 ACTR2P61160 394 aa27.38■■□□□ 1.97
USP47-205ENST00000525257 CAMK1Q14012 370 aa27.38■■□□□ 1.97
USP47-205ENST00000525257 SMAD2Q15796 467 aaKnown RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms