RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 CNOT8Q9UFF9 292 aaKnown RBP8.21□□□□□ -1.09
HMBOX1-211ENST00000524238 TRMT112Q9UI30 125 aaKnown RBP8.21□□□□□ -1.09
HMBOX1-211ENST00000524238 NOC2LQ9Y3T9 749 aaKnown RBP8.21□□□□□ -1.09
HMBOX1-211ENST00000524238 LAMB1P07942 1786 aa8.21□□□□□ -1.1
HMBOX1-211ENST00000524238 ANKRD33BA6NCL7 494 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 F8W031 263 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 STXBP3O00186 592 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 EPHB6O15197 1021 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 RGS16O15492 202 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 SLC26A4O43511 780 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 ATP2C2O75185 946 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 SMNDC1O75940 238 aaKnown RBP eCLIP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 FCER1AP12319 257 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 CHN1P15882 459 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 ATP2A2P16615 1042 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 MKRN4PQ13434 485 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 BLMHQ13867 455 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 NONOQ15233 471 aaKnown RBP eCLIP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 TXNRD1Q16881 649 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 CCDC152Q4G0S7 254 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 MIS18BP1Q6P0N0 1132 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 PEX26Q7Z412 305 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 DGKHQ86XP1 1220 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 MYOCDQ8IZQ8 938 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 MIGA1Q8NAN2 632 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 LARP4BQ92615 738 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 STAMBPL1Q96FJ0 436 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 ORAI2Q96SN7 254 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 ROPN1BQ9BZX4 212 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 ZMYND12Q9H0C1 365 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 PABPC3Q9H361 631 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 ROPN1Q9HAT0 212 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 SLC39A2Q9NP94 309 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 BMP2KQ9NSY1 1161 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 ARPP21Q9UBL0 812 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 MTRF1LQ9UGC7 380 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 PCDHA6Q9UN73 950 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 PCDHA8Q9Y5H6 950 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 MYH4Q9Y623 1939 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 ERVV-1B6SEH8 477 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 hCG_1984214I3L0E3 225 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 OPLAHO14841 1288 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 SNUPNO95149 360 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 FESP07332 822 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 CCNHP51946 323 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 PMS2P54278 862 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 POLR2FP61218 127 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 MRPS35P82673 323 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 KCNMA1Q12791 1236 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 TRAF1Q13077 416 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 RAPGEF1Q13905 1077 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 PDCD2Q16342 344 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 INF2Q27J81 1249 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 LRRC55Q6ZSA7 311 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 SLFN11Q7Z7L1 901 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 TBC1D1Q86TI0 1168 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 LMNTD2Q8IXW0 634 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 ZNF713Q8N859 430 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 OR2W6PQ8NHA6 318 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 MICAL1Q8TDZ2 1067 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 ATXN2LQ8WWM7 1075 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 GRAMD1AQ96CP6 724 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 THOC1Q96FV9 657 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 SELENOSQ9BQE4 189 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 RIOK1Q9BRS2 568 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 LSM14BQ9BX40 385 aaKnown RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 TMX4Q9H1E5 349 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 TMEM60Q9H2L4 133 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 C6orf50Q9HD87 102 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 NLRC4Q9NPP4 1024 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 ATP8A2Q9NTI2 1148 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 BARHL2Q9NY43 387 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 ETAA1Q9NY74 926 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 AMFRQ9UKV5 643 aa8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 USP15Q9Y4E8 981 aaPredicted RBP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.2□□□□□ -1.1
HMBOX1-211ENST00000524238 KIF13AQ9H1H9 1805 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 A0A087X0T9 212 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 TSPY2A6NKD2 308 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 PP2D1A8MPX8 630 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 PODXLO00592 558 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 DAPK3O43293 454 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 HIP1RO75146 1068 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 VIMP08670 466 aaKnown RBP8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 FAM228BP0C875 321 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 PECAM1P16284 738 aaPredicted RBP8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 FERP16591 822 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 IBSPP21815 317 aaPredicted RBP8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 IGHMBP2P38935 993 aaKnown RBP8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 PRKCIP41743 596 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 DNA2P51530 1060 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 COPS2P61201 443 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 CCDC15Q0P6D6 951 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 BIRC2Q13490 618 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 PDIA5Q14554 519 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 SPRED3Q2MJR0 410 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 ACCSLQ4AC99 568 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 SBK1Q52WX2 424 aa8.19□□□□□ -1.1
HMBOX1-211ENST00000524238 NEK8Q86SG6 692 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms