RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 FLT3P36888 993 aa6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 STAT5AP42229 794 aa6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 ITGA1P56199 1179 aa6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 KCNAB2Q13303 367 aa6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 SF1Q15637 639 aaKnown RBP6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 MRM1Q6IN84 353 aaKnown RBP6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 MILR1Q7Z6M3 343 aa6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 FAM126BQ8IXS8 530 aa6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 PMFBP1Q8TBY8 1022 aa6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 RSPH1Q8WYR4 309 aa6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 TRMT2BQ96GJ1 504 aaKnown RBP6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 BORCS6Q96GS4 357 aa6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 PCDH18Q9HCL0 1135 aa6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 LRP2BPQ9P2M1 347 aa6.86□□□□□ -1.31
EFCAB13-213ENST00000523978 PLIN1O60240 522 aa6.85□□□□□ -1.31
EFCAB13-213ENST00000523978 ITGB3P05106 788 aa6.85□□□□□ -1.31
EFCAB13-213ENST00000523978 SCG5P05408 212 aa6.85□□□□□ -1.31
EFCAB13-213ENST00000523978 SSBP05455 408 aaKnown RBP eCLIP6.85□□□□□ -1.31
EFCAB13-213ENST00000523978 PDGFRBP09619 1106 aa6.85□□□□□ -1.31
EFCAB13-213ENST00000523978 CT47B1P0C2W7 299 aaPredicted RBP6.85□□□□□ -1.31
EFCAB13-213ENST00000523978 HOXC12P31275 282 aa6.85□□□□□ -1.31
EFCAB13-213ENST00000523978 ZNF827Q17R98 1081 aa6.85□□□□□ -1.31
EFCAB13-213ENST00000523978 RGL3Q3MIN7 710 aa6.85□□□□□ -1.31
EFCAB13-213ENST00000523978 TNNI3KQ59H18 835 aa6.85□□□□□ -1.31
EFCAB13-213ENST00000523978 ZC3H18Q86VM9 953 aaKnown RBP6.85□□□□□ -1.31
EFCAB13-213ENST00000523978 ODF2LQ9ULJ1 636 aa6.85□□□□□ -1.31
EFCAB13-213ENST00000523978 KIF3BO15066 747 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 HIP1RO75146 1068 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 ATICP31939 592 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 NFE2L2Q16236 605 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 CR1LQ2VPA4 569 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 CCDC92Q53HC0 331 aaPredicted RBP6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 PRR31Q5SQ13 230 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 ACBD5Q5T8D3 534 aaPredicted RBP6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 KRT77Q7Z794 578 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 PPIL6Q8IXY8 311 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 SAMD3Q8N6K7 520 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 PAF1Q8N7H5 531 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 TTLL6Q8N841 843 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 RCBTB1Q8NDN9 531 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 TMEM169Q96HH4 297 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 TTC14Q96N46 770 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 RBM15Q96T37 977 aaKnown RBP eCLIP6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 TMX1Q9H3N1 280 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 YY1AP1Q9H869 796 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 PRKAG3Q9UGI9 489 aa6.84□□□□□ -1.31
EFCAB13-213ENST00000523978 MYO1BO43795 1136 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 DDAH1O94760 285 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 FAM163BP0C2L3 166 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 LCP1P13796 627 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 INSRRP14616 1297 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 ETFBP38117 255 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 KCNJ6P48051 423 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 GTF2A2P52657 109 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 TERF1P54274 439 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 GFRA1P56159 465 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 TESK1Q15569 626 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 ZXDCQ2QGD7 858 aaPredicted RBP6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 FAM26FQ5R3K3 315 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 MCTP2Q6DN12 878 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 DENND5AQ6IQ26 1287 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 CC2D1AQ6P1N0 951 aaPredicted RBP6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 PRPF38AQ8NAV1 312 aaKnown RBP6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 TMEM145Q8NBT3 493 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 VPS37AQ8NEZ2 397 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 SLC39A13Q96H72 371 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 GMLQ99445 158 aa6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 RBM28Q9NW13 759 aaKnown RBP6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 COA3Q9Y2R0 106 aaPredicted RBP6.83□□□□□ -1.32
EFCAB13-213ENST00000523978 FOSP01100 380 aaPredicted RBP6.82□□□□□ -1.32
EFCAB13-213ENST00000523978 MAGEA10P43363 369 aaPredicted RBP6.82□□□□□ -1.32
EFCAB13-213ENST00000523978 ADAM9Q13443 819 aa6.82□□□□□ -1.32
EFCAB13-213ENST00000523978 ANKRD13BQ86YJ7 626 aa6.82□□□□□ -1.32
EFCAB13-213ENST00000523978 C1orf159Q96HA4 380 aa6.82□□□□□ -1.32
EFCAB13-213ENST00000523978 YIPF4Q9BSR8 244 aa6.82□□□□□ -1.32
EFCAB13-213ENST00000523978 OSBPL2Q9H1P3 480 aa6.82□□□□□ -1.32
EFCAB13-213ENST00000523978 TMEM51Q9NW97 253 aa6.82□□□□□ -1.32
EFCAB13-213ENST00000523978 ZNF652Q9Y2D9 606 aa6.82□□□□□ -1.32
EFCAB13-213ENST00000523978 PCDHA2Q9Y5H9 948 aa6.82□□□□□ -1.32
EFCAB13-213ENST00000523978 MRPL42Q9Y6G3 142 aaKnown RBP6.82□□□□□ -1.32
EFCAB13-213ENST00000523978 CCDC163A0A0D9SF12 145 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 MROH6A6NGR9 719 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 DDX3XO00571 662 aaKnown RBP eCLIP6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 CAND2O75155 1236 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 CPP00450 1065 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 LTBRP36941 435 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 ADAM17P78536 824 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 RAPGEF1Q13905 1077 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 PUM1Q14671 1186 aaKnown RBP eCLIP6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 VPS37DQ86XT2 251 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 CHPFQ8IZ52 775 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 CCDC89Q8N998 374 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 TXNDC5Q8NBS9 432 aaKnown RBP6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 ARRDC4Q8NCT1 418 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 CHAMP1Q96JM3 812 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 MPHOSPH6Q99547 160 aaKnown RBP6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 GPR20Q99678 358 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 SMPD4Q9NXE4 827 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 ACAD8Q9UKU7 415 aa6.81□□□□□ -1.32
EFCAB13-213ENST00000523978 ISY1Q9ULR0 285 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms