RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 PPIGQ13427 754 aaKnown RBP eCLIP14.18□□□□□ -0.141e-7■■□□□ 12.6
VEGFA-225ENST00000523950 NOSTRINQ8IVI9 506 aa14.18□□□□□ -0.14
VEGFA-225ENST00000523950 SLFN12Q8IYM2 578 aa14.18□□□□□ -0.14
VEGFA-225ENST00000523950 PCYT2Q99447 389 aa14.18□□□□□ -0.14
VEGFA-225ENST00000523950 ZNF302Q9NR11 478 aa14.18□□□□□ -0.14
VEGFA-225ENST00000523950 NOL7Q9UMY1 257 aaKnown RBP14.18□□□□□ -0.14
VEGFA-225ENST00000523950 TRIP12Q14669 1992 aaPredicted RBP14.18□□□□□ -0.14
VEGFA-225ENST00000523950 DNAH12Q6ZR08 3092 aa14.18□□□□□ -0.14
VEGFA-225ENST00000523950 FAM205CA6NFA0 338 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 RRN3P2A6NIE6 340 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 H3BQV1 296 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 BACH1O14867 736 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 CAND2O75155 1236 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 PARNO95453 639 aaKnown RBP14.17□□□□□ -0.14
VEGFA-225ENST00000523950 CYP2C9P11712 490 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 PDCP20941 246 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 ITGB8P26012 769 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 RFC2P35250 354 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 PPP2R5CQ13362 524 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 B3GNT9Q6UX72 402 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 CCDC60Q8IWA6 550 aaPredicted RBP14.17□□□□□ -0.14
VEGFA-225ENST00000523950 RETREG2Q8NC44 543 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 ATP6V0A1Q93050 837 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 PPP1R12CQ9BZL4 782 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 UBE2OQ9C0C9 1292 aaKnown RBP14.17□□□□□ -0.14
VEGFA-225ENST00000523950 RNPEPQ9H4A4 650 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 DISC1Q9NRI5 854 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 COLQQ9Y215 455 aaPredicted RBP14.17□□□□□ -0.14
VEGFA-225ENST00000523950 SAMM50Q9Y512 469 aa14.17□□□□□ -0.14
VEGFA-225ENST00000523950 MAFBQ9Y5Q3 323 aaPredicted RBP14.17□□□□□ -0.14
VEGFA-225ENST00000523950 IGSF9BQ9UPX0 1349 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 MARCH6O60337 910 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 HBP1O60381 514 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 NEMFO60524 1076 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 PFKMP08237 780 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 MARK3P27448 753 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 ADAM17P78536 824 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 PPFIA1Q13136 1202 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 PDXDC2PQ6P474 469 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 SERINC5Q86VE9 423 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 HSCBQ8IWL3 235 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 PPP1R13LQ8WUF5 828 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 LMBR1Q8WVP7 490 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 FAM167AQ96KS9 214 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 CTAGE1Q96RT6 745 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 UNC45AQ9H3U1 944 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 COL1A2P08123 1366 aa14.16□□□□□ -0.14
VEGFA-225ENST00000523950 POTEB3A0JP26 581 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 DKC1O60832 514 aaKnown RBP eCLIP14.15□□□□□ -0.14
VEGFA-225ENST00000523950 CYP2C18P33260 490 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 PLCB4Q15147 1175 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 GRIK4Q16099 956 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 CALCRLQ16602 461 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 LARP1BQ659C4 914 aaKnown RBP14.15□□□□□ -0.14
VEGFA-225ENST00000523950 SWSAP1Q6NVH7 229 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 TAF2Q6P1X5 1199 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 PSRC1Q6PGN9 363 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-225ENST00000523950 POTEBQ6S5H4 581 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 MIER3Q7Z3K6 550 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 RPAINQ86UA6 219 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 RPUSD2Q8IZ73 545 aaKnown RBP14.15□□□□□ -0.14
VEGFA-225ENST00000523950 TDHQ8IZJ6 230 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 BBXQ8WY36 941 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-225ENST00000523950 HAS1Q92839 578 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 UIMC1Q96RL1 719 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 WNT8AQ9H1J5 351 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 SETD4Q9NVD3 440 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 GABBR1Q9UBS5 961 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 VAV3Q9UKW4 847 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 CEP131Q9UPN4 1083 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 TRPC6Q9Y210 931 aa14.15□□□□□ -0.14
VEGFA-225ENST00000523950 MBLAC1A4D2B0 266 aaPredicted RBP14.14□□□□□ -0.15
VEGFA-225ENST00000523950 KIF28PB7ZC32 967 aa14.14□□□□□ -0.15
VEGFA-225ENST00000523950 TREHO43280 583 aa14.14□□□□□ -0.15
VEGFA-225ENST00000523950 CHMP2AO43633 222 aa14.14□□□□□ -0.15
VEGFA-225ENST00000523950 IQCF3P0C7M6 154 aa14.14□□□□□ -0.15
VEGFA-225ENST00000523950 INSRRP14616 1297 aa14.14□□□□□ -0.15
VEGFA-225ENST00000523950 SELPP16109 830 aa14.14□□□□□ -0.15
VEGFA-225ENST00000523950 HIC1Q14526 733 aa14.14□□□□□ -0.15
VEGFA-225ENST00000523950 ZNF484Q5JVG2 852 aa14.14□□□□□ -0.15
VEGFA-225ENST00000523950 TTC38Q5R3I4 469 aa14.14□□□□□ -0.15
VEGFA-225ENST00000523950 DHX38Q92620 1227 aaKnown RBP14.14□□□□□ -0.15
VEGFA-225ENST00000523950 IL23AQ9NPF7 189 aa14.14□□□□□ -0.15
VEGFA-225ENST00000523950 TUBE1Q9UJT0 475 aa14.14□□□□□ -0.15
VEGFA-225ENST00000523950 UMODL1Q5DID0 1318 aa14.14□□□□□ -0.15
VEGFA-225ENST00000523950 CEP290O15078 2479 aa14.13□□□□□ -0.15
VEGFA-225ENST00000523950 CKBP12277 381 aa14.13□□□□□ -0.15
VEGFA-225ENST00000523950 CSF2RAP15509 400 aa14.13□□□□□ -0.15
VEGFA-225ENST00000523950 CCL23P55773 120 aa14.13□□□□□ -0.15
VEGFA-225ENST00000523950 ZNF200P98182 395 aaPredicted RBP14.13□□□□□ -0.15
VEGFA-225ENST00000523950 TRIM71Q2Q1W2 868 aaKnown RBP14.13□□□□□ -0.15
VEGFA-225ENST00000523950 RILPL1Q5EBL4 403 aa14.13□□□□□ -0.15
VEGFA-225ENST00000523950 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
VEGFA-225ENST00000523950 LRRC8DQ7L1W4 858 aa14.13□□□□□ -0.15
VEGFA-225ENST00000523950 RSPH3Q86UC2 560 aa14.13□□□□□ -0.15
VEGFA-225ENST00000523950 CKAP2LQ8IYA6 745 aa14.13□□□□□ -0.15
VEGFA-225ENST00000523950 MTMR9Q96QG7 549 aa14.13□□□□□ -0.15
VEGFA-225ENST00000523950 PCDHA12Q9UN75 941 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms