RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 TRIM29Q14134 588 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 BECN1Q14457 450 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 CCL14Q16627 93 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 KRT40Q6A162 431 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 FBXO46Q6PJ61 603 aaPredicted RBP9.54□□□□□ -0.88
VPS13B-210ENST00000521932 FCHSD1Q86WN1 690 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 BLIDQ8IZY5 108 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 TRIB2Q92519 343 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 C8orf76Q96K31 380 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 TINF2Q9BSI4 451 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 PXMP2Q9NR77 195 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 BIN2Q9UBW5 565 aaPredicted RBP9.54□□□□□ -0.88
VPS13B-210ENST00000521932 NRBP1Q9UHY1 535 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 PCDHA6Q9UN73 950 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 KCNJ14Q9UNX9 436 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 PCDHA8Q9Y5H6 950 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 FRMPD4Q14CM0 1322 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 RPTORQ8N122 1335 aa9.54□□□□□ -0.88
VPS13B-210ENST00000521932 SLC35F4A4IF30 521 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 SPDYE3A6NKU9 549 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 SNAI1O95863 264 aaPredicted RBP9.53□□□□□ -0.88
VPS13B-210ENST00000521932 HMGCRP04035 888 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 PDCP20941 246 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 GRK4P32298 578 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 PGM5Q15124 567 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 UBE2SQ16763 222 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 MAP3K21Q5TCX8 1036 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 ARHGEF16Q5VV41 709 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 PCNX4Q63HM2 1172 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 LARP1BQ659C4 914 aaKnown RBP9.53□□□□□ -0.88
VPS13B-210ENST00000521932 XRRA1Q6P2D8 792 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 ARMCX2Q7L311 632 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 VSIG10LQ86VR7 867 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 REXO1Q8N1G1 1221 aaKnown RBP9.53□□□□□ -0.88
VPS13B-210ENST00000521932 CCDC155Q8N6L0 562 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 GPR161Q8N6U8 529 aaKnown RBP9.53□□□□□ -0.88
VPS13B-210ENST00000521932 CRYGNQ8WXF5 182 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 TNFRSF25Q93038 417 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 MPHOSPH6Q99547 160 aaKnown RBP9.53□□□□□ -0.88
VPS13B-210ENST00000521932 PDCD2LQ9BRP1 358 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 ABHD16BQ9H3Z7 469 aa9.53□□□□□ -0.88
VPS13B-210ENST00000521932 BTBD18B2RXH4 712 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 STAM2O75886 525 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 ELNP15502 786 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 EIF2AK2P19525 551 aaKnown RBP9.52□□□□□ -0.89
VPS13B-210ENST00000521932 U2AF2P26368 475 aaKnown RBP eCLIP9.52□□□□□ -0.89
VPS13B-210ENST00000521932 CYP2C19P33261 490 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 KRT2P35908 639 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 SREBF1P36956 1147 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 STXBP2Q15833 593 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 MFSD14CQ5VZR4 134 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 ANO3Q9BYT9 981 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 KATNBL1Q9H079 304 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 FOXP1Q9H334 677 aaPredicted RBP9.52□□□□□ -0.89
VPS13B-210ENST00000521932 BRMS1Q9HCU9 246 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 TMEM260Q9NX78 707 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 PCDHB11Q9Y5F2 797 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 BRCA2P51587 3418 aa9.52□□□□□ -0.89
VPS13B-210ENST00000521932 LCTP09848 1927 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 RBBP6Q7Z6E9 1792 aaKnown RBP9.51□□□□□ -0.89
VPS13B-210ENST00000521932 EDIL3O43854 480 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 EIF3JO75822 258 aaKnown RBP9.51□□□□□ -0.89
VPS13B-210ENST00000521932 HSP90AA1P07900 732 aaKnown RBP9.51□□□□□ -0.89
VPS13B-210ENST00000521932 CYP3A4P08684 503 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 ZNF865P0CJ78 1059 aaPredicted RBP9.51□□□□□ -0.89
VPS13B-210ENST00000521932 CYBAP13498 195 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 SYT1P21579 422 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 USP11P51784 963 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 MCCD1P59942 119 aaPredicted RBP9.51□□□□□ -0.89
VPS13B-210ENST00000521932 MRPS9P82933 396 aaKnown RBP9.51□□□□□ -0.89
VPS13B-210ENST00000521932 CACNB2Q08289 660 aaPredicted RBP9.51□□□□□ -0.89
VPS13B-210ENST00000521932 ACVR2BQ13705 512 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 SAFBQ15424 915 aaKnown RBP eCLIP9.51□□□□□ -0.89
VPS13B-210ENST00000521932 SLC9C1Q4G0N8 1177 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 JAKMIP3Q5VZ66 844 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 TAPT1Q6NXT6 567 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 KRT25Q7Z3Z0 450 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 DIS3L2Q8IYB7 885 aaKnown RBP9.51□□□□□ -0.89
VPS13B-210ENST00000521932 RASGRP4Q8TDF6 673 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 ARMC5Q96C12 935 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 MCOLN1Q9GZU1 580 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 EHMT1Q9H9B1 1298 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 VTA1Q9NP79 307 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 RBM19Q9Y4C8 960 aaKnown RBP9.51□□□□□ -0.89
VPS13B-210ENST00000521932 PLXNA1Q9UIW2 1896 aa9.51□□□□□ -0.89
VPS13B-210ENST00000521932 RBM47A0AV96 593 aaKnown RBP9.5□□□□□ -0.89
VPS13B-210ENST00000521932 MAFGO15525 162 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 INHAP05111 366 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 CCND2P30279 289 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 CIITAP33076 1130 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 UBXN2AP68543 259 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 ARHGAP4P98171 946 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 KRT76Q01546 638 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 GUCY1B3Q02153 619 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 VAC14Q08AM6 782 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 NONOQ15233 471 aaKnown RBP eCLIP9.5□□□□□ -0.89
VPS13B-210ENST00000521932 EARS2Q5JPH6 523 aaKnown RBP9.5□□□□□ -0.89
VPS13B-210ENST00000521932 COL13A1Q5TAT6 717 aaPredicted RBP9.5□□□□□ -0.89
VPS13B-210ENST00000521932 IL31RAQ8NI17 732 aa9.5□□□□□ -0.89
VPS13B-210ENST00000521932 TBCKQ8TEA7 893 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms