RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 RRN3P2A6NIE6 340 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 LINC01565O15544 149 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 DGKIO75912 1065 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 PTPN5P54829 565 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 MRPS6P82932 125 aaKnown RBP13.21□□□□□ -0.29
MRPS28-206ENST00000520946 NUCB1Q02818 461 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 ADAM15Q13444 863 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 FBXO47Q5MNV8 452 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 NFXL1Q6ZNB6 911 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 NPAS4Q8IUM7 802 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 SMC5Q8IY18 1101 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 CMTR2Q8IYT2 770 aaKnown RBP13.21□□□□□ -0.29
MRPS28-206ENST00000520946 P2RX5Q93086 422 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 GPRASP2Q96D09 838 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 AAASQ9NRG9 546 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
MRPS28-206ENST00000520946 MYO7AQ13402 2215 aa13.21□□□□□ -0.29
MRPS28-206ENST00000520946 PIEZO1Q92508 2521 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 TMEM221A6NGB7 291 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 SPDYE3A6NKU9 549 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 M0R296 226 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 CYTH3O43739 400 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 TBX10O75333 385 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 CD52P31358 61 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 NRIP1P48552 1158 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 GNAQP50148 359 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 ADAM17P78536 824 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 PAK2Q13177 524 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 SEMA3FQ13275 785 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 MTMR1Q13613 665 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 CASC1Q6TDU7 716 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 TRIM67Q6ZTA4 783 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 ZBTB33Q86T24 672 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 KLHL23Q8NBE8 558 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 ZNF689Q96CS4 500 aaPredicted RBP13.2□□□□□ -0.3
MRPS28-206ENST00000520946 LZTS2Q9BRK4 669 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 TLE6Q9H808 572 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 PSTPIP2Q9H939 334 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 PCDHB7Q9Y5E2 793 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 PCDHB12Q9Y5F1 795 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 MRPL42Q9Y6G3 142 aaKnown RBP13.2□□□□□ -0.3
MRPS28-206ENST00000520946 RALGAPA2Q2PPJ7 1873 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 LAMA4Q16363 1823 aa13.2□□□□□ -0.3
MRPS28-206ENST00000520946 BAZ2BQ9UIF8 2168 aaKnown RBP13.2□□□□□ -0.3
MRPS28-206ENST00000520946 ITGB1P05556 798 aa13.19□□□□□ -0.3
MRPS28-206ENST00000520946 SRGAP2BP0DMP2 458 aa13.19□□□□□ -0.3
MRPS28-206ENST00000520946 SCG2P13521 617 aa13.19□□□□□ -0.3
MRPS28-206ENST00000520946 MGAT3Q09327 533 aa13.19□□□□□ -0.3
MRPS28-206ENST00000520946 TMEM62Q0P6H9 643 aa13.19□□□□□ -0.3
MRPS28-206ENST00000520946 NFX1Q12986 1120 aaKnown RBP13.19□□□□□ -0.3
MRPS28-206ENST00000520946 EFHBQ8N7U6 833 aa13.19□□□□□ -0.3
MRPS28-206ENST00000520946 POF1BQ8WVV4 589 aa13.19□□□□□ -0.3
MRPS28-206ENST00000520946 RPGRIP1Q96KN7 1286 aa13.19□□□□□ -0.3
MRPS28-206ENST00000520946 SDF4Q9BRK5 362 aa13.19□□□□□ -0.3
MRPS28-206ENST00000520946 GINS2Q9Y248 185 aa13.19□□□□□ -0.3
MRPS28-206ENST00000520946 TRPV2Q9Y5S1 764 aa13.19□□□□□ -0.3
MRPS28-206ENST00000520946 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 FRMPD4Q14CM0 1322 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 FSD2A1L4K1 749 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 PIK3CDO00329 1044 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 MAFGO15525 162 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 INSRRP14616 1297 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 TROAPQ12815 778 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 ODR4Q5SWX8 454 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 SPPL3Q8TCT6 385 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 IRF2BPLQ9H1B7 796 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 TELO2Q9Y4R8 837 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 SQORQ9Y6N5 450 aa13.18□□□□□ -0.3
MRPS28-206ENST00000520946 GSTTP1A0A1W2PQM5 241 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 DENND3A2RUS2 1198 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 MBLAC1A4D2B0 266 aaPredicted RBP13.17□□□□□ -0.3
MRPS28-206ENST00000520946 E7EWF7 191 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 ATP9AO75110 1047 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 DDAH1O94760 285 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 EYA4O95677 639 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 CYP21A2P08686 494 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 KCNA2P16389 499 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 ZXDAP98168 799 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 KRT76Q01546 638 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 COASYQ13057 564 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 SLC35G1Q2M3R5 365 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 BMP8AQ7Z5Y6 402 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 THNSL1Q8IYQ7 743 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 NEK1Q96PY6 1258 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 MYL10Q9BUA6 226 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 PHF7Q9BWX1 381 aaPredicted RBP13.17□□□□□ -0.3
MRPS28-206ENST00000520946 SPZ1Q9BXG8 430 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 CELF4Q9BZC1 486 aaKnown RBP13.17□□□□□ -0.3
MRPS28-206ENST00000520946 AGO3Q9H9G7 860 aaKnown RBP13.17□□□□□ -0.3
MRPS28-206ENST00000520946 SENP2Q9HC62 589 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 JPH1Q9HDC5 661 aaPredicted RBP13.17□□□□□ -0.3
MRPS28-206ENST00000520946 SLC9A2Q9UBY0 812 aa13.17□□□□□ -0.3
MRPS28-206ENST00000520946 BARX2Q9UMQ3 279 aaPredicted RBP13.17□□□□□ -0.3
MRPS28-206ENST00000520946 USP15Q9Y4E8 981 aaPredicted RBP13.17□□□□□ -0.3
MRPS28-206ENST00000520946 TBKBP1A7MCY6 615 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 MEIS2O14770 477 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 LINC00271P0C7V0 271 aa13.16□□□□□ -0.3
MRPS28-206ENST00000520946 SMARCA1P28370 1054 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms