RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 TRPV6Q9H1D0 765 aa25.46■■□□□ 1.67
SKP1-206ENST00000519321 VAV3Q9UKW4 847 aa25.46■■□□□ 1.67
SKP1-206ENST00000519321 NRCAMQ92823 1304 aa25.45■■□□□ 1.66
SKP1-206ENST00000519321 C17orf102A2RUQ5 167 aa25.45■■□□□ 1.66
SKP1-206ENST00000519321 TOB1P50616 345 aaPredicted RBP25.45■■□□□ 1.66
SKP1-206ENST00000519321 RNPEPQ9H4A4 650 aa25.45■■□□□ 1.66
SKP1-206ENST00000519321 TRMT13Q9NUP7 481 aaKnown RBP25.45■■□□□ 1.66
SKP1-206ENST00000519321 TBX21Q9UL17 535 aa25.45■■□□□ 1.66
SKP1-206ENST00000519321 ZMYND8Q9ULU4 1186 aaPredicted RBP25.45■■□□□ 1.66
SKP1-206ENST00000519321 MAFBQ9Y5Q3 323 aaPredicted RBP25.45■■□□□ 1.66
SKP1-206ENST00000519321 PDE4DIPQ5VU43 2346 aa25.45■■□□□ 1.66
SKP1-206ENST00000519321 LAD1O00515 517 aa25.44■■□□□ 1.66
SKP1-206ENST00000519321 OR52Z1P0C646 297 aa25.44■■□□□ 1.66
SKP1-206ENST00000519321 MARK3P27448 753 aa25.44■■□□□ 1.66
SKP1-206ENST00000519321 TXKP42681 527 aa25.44■■□□□ 1.66
SKP1-206ENST00000519321 GDF6Q6KF10 455 aaPredicted RBP25.44■■□□□ 1.66
SKP1-206ENST00000519321 TTC12Q9H892 705 aaPredicted RBP25.44■■□□□ 1.66
SKP1-206ENST00000519321 GABBR1Q9UBS5 961 aa25.44■■□□□ 1.66
SKP1-206ENST00000519321 TRPC6Q9Y210 931 aa25.44■■□□□ 1.66
SKP1-206ENST00000519321 RRN3P2A6NIE6 340 aa25.43■■□□□ 1.66
SKP1-206ENST00000519321 H0YGN5 161 aa25.43■■□□□ 1.66
SKP1-206ENST00000519321 DKC1O60832 514 aaKnown RBP eCLIP25.43■■□□□ 1.66
SKP1-206ENST00000519321 RAG1P15918 1043 aa25.43■■□□□ 1.66
SKP1-206ENST00000519321 HOXC8P31273 242 aa25.43■■□□□ 1.66
SKP1-206ENST00000519321 PLCB4Q15147 1175 aa25.43■■□□□ 1.66
SKP1-206ENST00000519321 PPP1R13LQ8WUF5 828 aa25.43■■□□□ 1.66
SKP1-206ENST00000519321 ATP6V0A1Q93050 837 aa25.43■■□□□ 1.66
SKP1-206ENST00000519321 FAM167AQ96KS9 214 aa25.43■■□□□ 1.66
SKP1-206ENST00000519321 TMEM60Q9H2L4 133 aa25.43■■□□□ 1.66
SKP1-206ENST00000519321 ZSCAN16Q9H4T2 348 aaPredicted RBP25.43■■□□□ 1.66
SKP1-206ENST00000519321 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.43■■□□□ 1.66
SKP1-206ENST00000519321 MTMR6Q9Y217 621 aa25.43■■□□□ 1.66
SKP1-206ENST00000519321 PCDHB6Q9Y5E3 794 aa25.43■■□□□ 1.66
SKP1-206ENST00000519321 IGSF9BQ9UPX0 1349 aa25.42■■□□□ 1.66
SKP1-206ENST00000519321 POTEB3A0JP26 581 aa25.42■■□□□ 1.66
SKP1-206ENST00000519321 HBP1O60381 514 aa25.42■■□□□ 1.66
SKP1-206ENST00000519321 SYN1P17600 705 aa25.42■■□□□ 1.66
SKP1-206ENST00000519321 PPFIA1Q13136 1202 aa25.42■■□□□ 1.66
SKP1-206ENST00000519321 EPHA7Q15375 998 aa25.42■■□□□ 1.66
SKP1-206ENST00000519321 POTEBQ6S5H4 581 aa25.42■■□□□ 1.66
SKP1-206ENST00000519321 SH3RF1Q7Z6J0 888 aa25.42■■□□□ 1.66
SKP1-206ENST00000519321 FERMT3Q86UX7 667 aa25.42■■□□□ 1.66
SKP1-206ENST00000519321 CKAP2LQ8IYA6 745 aa25.42■■□□□ 1.66
SKP1-206ENST00000519321 CCDC155Q8N6L0 562 aa25.42■■□□□ 1.66
SKP1-206ENST00000519321 ATP8B4Q8TF62 1192 aa25.42■■□□□ 1.66
SKP1-206ENST00000519321 LBHD1Q9BQE6 289 aaPredicted RBP25.42■■□□□ 1.66
SKP1-206ENST00000519321 TRIM43BA6NCK2 446 aa25.41■■□□□ 1.66
SKP1-206ENST00000519321 SPIRE1Q08AE8 756 aa25.41■■□□□ 1.66
SKP1-206ENST00000519321 PTK7Q13308 1070 aa25.41■■□□□ 1.66
SKP1-206ENST00000519321 NBR1Q14596 966 aa25.41■■□□□ 1.66
SKP1-206ENST00000519321 TMEM266Q2M3C6 531 aa25.41■■□□□ 1.66
SKP1-206ENST00000519321 SPRYD3Q8NCJ5 442 aa25.41■■□□□ 1.66
SKP1-206ENST00000519321 BBXQ8WY36 941 aaPredicted RBP25.41■■□□□ 1.66
SKP1-206ENST00000519321 TRIM43Q96BQ3 446 aaPredicted RBP25.41■■□□□ 1.66
SKP1-206ENST00000519321 SETD4Q9NVD3 440 aa25.41■■□□□ 1.66
SKP1-206ENST00000519321 MYH9P35579 1960 aaKnown RBP25.4■■□□□ 1.66
SKP1-206ENST00000519321 BMP15O95972 392 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 TIMP1P01033 207 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 P4HBP07237 508 aaKnown RBP25.4■■□□□ 1.66
SKP1-206ENST00000519321 INSRRP14616 1297 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 PTGDRQ13258 359 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 BFSP2Q13515 415 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 GRIK4Q16099 956 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 PRPF38BQ5VTL8 546 aaKnown RBP25.4■■□□□ 1.66
SKP1-206ENST00000519321 NCAPH2Q6IBW4 605 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 C4orf32Q8N8J7 132 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 CAGE1Q8TC20 777 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 HIPK3Q9H422 1215 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 NRBP2Q9NSY0 501 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 CEP131Q9UPN4 1083 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 COL1A2P08123 1366 aa25.4■■□□□ 1.66
SKP1-206ENST00000519321 KAT6AQ92794 2004 aa25.39■■□□□ 1.66
SKP1-206ENST00000519321 EML1O00423 815 aa25.39■■□□□ 1.66
SKP1-206ENST00000519321 PRPHP41219 470 aa25.39■■□□□ 1.66
SKP1-206ENST00000519321 PSMC5P62195 406 aa25.39■■□□□ 1.66
SKP1-206ENST00000519321 RESTQ13127 1097 aa25.39■■□□□ 1.66
SKP1-206ENST00000519321 NEK9Q8TD19 979 aa25.39■■□□□ 1.66
SKP1-206ENST00000519321 LMBR1Q8WVP7 490 aa25.39■■□□□ 1.66
SKP1-206ENST00000519321 RAB34Q9BZG1 259 aa25.39■■□□□ 1.66
SKP1-206ENST00000519321 PITPNM1O00562 1244 aa25.38■■□□□ 1.65
SKP1-206ENST00000519321 CYP2C9P11712 490 aa25.38■■□□□ 1.65
SKP1-206ENST00000519321 QARSP47897 775 aaKnown RBP25.38■■□□□ 1.65
SKP1-206ENST00000519321 ADAM17P78536 824 aa25.38■■□□□ 1.65
SKP1-206ENST00000519321 ZNF484Q5JVG2 852 aa25.38■■□□□ 1.65
SKP1-206ENST00000519321 SERINC5Q86VE9 423 aa25.38■■□□□ 1.65
SKP1-206ENST00000519321 RETREG2Q8NC44 543 aa25.38■■□□□ 1.65
SKP1-206ENST00000519321 NOC4LQ9BVI4 516 aaKnown RBP25.38■■□□□ 1.65
SKP1-206ENST00000519321 TNRC18O15417 2968 aaPredicted RBP25.38■■□□□ 1.65
SKP1-206ENST00000519321 OATP04181 439 aa25.37■■□□□ 1.65
SKP1-206ENST00000519321 RPLP2P05387 115 aaKnown RBP25.37■■□□□ 1.65
SKP1-206ENST00000519321 ATP4AP20648 1035 aa25.37■■□□□ 1.65
SKP1-206ENST00000519321 TECP42680 631 aa25.37■■□□□ 1.65
SKP1-206ENST00000519321 FXR2P51116 673 aaKnown RBP eCLIP25.37■■□□□ 1.65
SKP1-206ENST00000519321 ZNF200P98182 395 aaPredicted RBP25.37■■□□□ 1.65
SKP1-206ENST00000519321 PRKCEQ02156 737 aa25.37■■□□□ 1.65
SKP1-206ENST00000519321 XKR3Q5GH77 459 aa25.37■■□□□ 1.65
SKP1-206ENST00000519321 BANK1Q8NDB2 785 aa25.37■■□□□ 1.65
SKP1-206ENST00000519321 CTAGE1Q96RT6 745 aa25.37■■□□□ 1.65
SKP1-206ENST00000519321 PPP1R12CQ9BZL4 782 aa25.37■■□□□ 1.65
SKP1-206ENST00000519321 TUBE1Q9UJT0 475 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms