RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 HAND2P61296 217 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 ARHGAP4P98171 946 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 SEMA3FQ13275 785 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 NEDD9Q14511 834 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 GNPTABQ3T906 1256 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 CCDC178Q5BJE1 867 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 MCTP2Q6DN12 878 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 ZNF589Q86UQ0 364 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 KLHL23Q8NBE8 558 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 RASGRP4Q8TDF6 673 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 RPGRIP1Q96KN7 1286 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 RIPOR3Q96MK2 946 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 SQORQ9Y6N5 450 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 TPRP12270 2363 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 MYO10Q9HD67 2058 aa9.75□□□□□ -0.85
CTNNA1-215ENST00000519309 OTOGLQ3ZCN5 2332 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 BAZ2BQ9UIF8 2168 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 DNAH14Q0VDD8 3507 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 KDM4AO75164 1064 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 PARP1P09874 1014 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 DUSP6Q16828 381 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 TMEM184AQ6ZMB5 413 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 RUFY4Q6ZNE9 571 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 RSPH3Q86UC2 560 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 IQCA1Q86XH1 822 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 UBALD2Q8IYN6 164 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 ENAHQ8N8S7 591 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 TMEM105Q8N8V8 129 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 EVI5LQ96CN4 794 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 FTHL17Q9BXU8 183 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 BCAS3Q9H6U6 928 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 KAT14Q9H8E8 782 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 TUBE1Q9UJT0 475 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 TRPC6Q9Y210 931 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 PCDHGC5Q9Y5F6 944 aa9.74□□□□□ -0.85
CTNNA1-215ENST00000519309 FANCMQ8IYD8 2048 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 ACACBO00763 2458 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 SPATA31C2B4DYI2 1134 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 FSCN2O14926 492 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 ZBTB5O15062 677 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 FIBPO43427 364 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 DHX16O60231 1041 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 SRGAP2BP0DMP2 458 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 HOXA13P31271 388 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 ID4P47928 161 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 MRPS6P82932 125 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 MRPS9P82933 396 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 MTMR3Q13615 1198 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 MCMDC2Q4G0Z9 681 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 PDE12Q6L8Q7 609 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 FAM43BQ6ZT52 329 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 CYFIP1Q7L576 1253 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 NKD2Q969F2 451 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 FAM227BQ96M60 508 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 NEK1Q96PY6 1258 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 SENP7Q9BQF6 1050 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 ZKSCAN3Q9BRR0 538 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 S1PR5Q9H228 398 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 AGO3Q9H9G7 860 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 SORCS3Q9UPU3 1222 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 SUPT16HQ9Y5B9 1047 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 CDY2AQ9Y6F7 541 aa9.73□□□□□ -0.85
CTNNA1-215ENST00000519309 TRIM6-TRIM34B2RNG4 842 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 GCOM1H8Y6P7 765 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 POLR2MP0CAP2 368 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 STAG3L1P0CL83 205 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 SCG2P13521 617 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 CD52P31358 61 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 RBM10P98175 930 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 PPFIA1Q13136 1202 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 GRIK4Q16099 956 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 MARCH8Q5T0T0 291 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 RBM23Q86U06 439 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 RTN4RL1Q86UN2 441 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 KREMEN2Q8NCW0 462 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 ZSCAN10Q96SZ4 725 aaPredicted RBP9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 TLE6Q9H808 572 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 LZTS1Q9Y250 596 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 NR2E1Q9Y466 385 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 PCDHA1Q9Y5I3 950 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 IGSF9BQ9UPX0 1349 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 KDM3AQ9Y4C1 1321 aa9.72□□□□□ -0.85
CTNNA1-215ENST00000519309 BRD1O95696 1058 aa9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 HOXB8P17481 243 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 TRAF1Q13077 416 aa9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 NMIQ13287 307 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 SLC35G1Q2M3R5 365 aa9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 PAN2Q504Q3 1202 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 ASTLQ6HA08 431 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 ANKRD54Q6NXT1 300 aa9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 SYCE2Q6PIF2 218 aa9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 FRMD5Q7Z6J6 570 aa9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 STAG2Q8N3U4 1231 aa9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 DNAJB3Q8WWF6 145 aa9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 YTHDC1Q96MU7 727 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 TELO2Q9Y4R8 837 aa9.71□□□□□ -0.86
CTNNA1-215ENST00000519309 PALM3A6NDB9 673 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-215ENST00000519309 KLRF2D3W0D1 207 aa9.7□□□□□ -0.86
CTNNA1-215ENST00000519309 PER2O15055 1255 aa9.7□□□□□ -0.86
CTNNA1-215ENST00000519309 FGF18O76093 207 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms