RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 SHOX2O60902 331 aaPredicted RBP19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 HSF2BPO75031 334 aa19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 SHMT1P34896 483 aa19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 ITIH3Q06033 890 aa19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 KCNH2Q12809 1159 aa19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 PABPC4Q13310 644 aaKnown RBP eCLIP19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 NAB2Q15742 525 aa19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 PROM2Q8N271 834 aa19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 SH3GL2Q99962 352 aa19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 LRRC4BQ9NT99 713 aa19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 PCDHAC2Q9Y5I4 1007 aa19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 MYH7BA7E2Y1 1941 aa19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 SRCAPQ6ZRS2 3230 aa19.9■□□□□ 0.78
ARFGAP1-209ENST00000518794 IGKV6D-41A0A0C4DH26 115 aa19.89■□□□□ 0.78
ARFGAP1-209ENST00000518794 NFIAQ12857 509 aa19.89■□□□□ 0.78
ARFGAP1-209ENST00000518794 SLC18A3Q16572 532 aa19.89■□□□□ 0.78
ARFGAP1-209ENST00000518794 DOK7Q18PE1 504 aa19.89■□□□□ 0.78
ARFGAP1-209ENST00000518794 CASKIN2Q8WXE0 1202 aa19.89■□□□□ 0.78
ARFGAP1-209ENST00000518794 USP40Q9NVE5 1235 aa19.89■□□□□ 0.78
ARFGAP1-209ENST00000518794 SERPINB13Q9UIV8 391 aa19.89■□□□□ 0.78
ARFGAP1-209ENST00000518794 RBAK-RBAKDNI3L0D1 243 aa19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 ZBTB5O15062 677 aa19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 NR2F2P24468 414 aa19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 MRPL12P52815 198 aaKnown RBP19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 PTK2Q05397 1052 aa19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 CCDC65Q8IXS2 484 aa19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 PPFIA1Q13136 1202 aa19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 PPP2R5AQ15172 486 aa19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 ASIC2Q16515 512 aa19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 EMBQ6PCB8 327 aa19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 GJB7Q6PEY0 223 aa19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 C15orf52Q6ZUT6 534 aaKnown RBP19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 FAM163AQ96GL9 167 aaPredicted RBP19.89■□□□□ 0.77
ARFGAP1-209ENST00000518794 ZNF233A6NK53 670 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 RGL2O15211 777 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 SERPINB2P05120 415 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 CYP4A11Q02928 519 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 QRICH1Q2TAL8 776 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 DCAF17Q5H9S7 520 aaPredicted RBP19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 RNF10Q8N5U6 811 aaKnown RBP19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 LRRC27Q9C0I9 530 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 GANQ9H2C0 597 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 AJAP1Q9UKB5 411 aaPredicted RBP19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 RSPH10B2B2RC85 870 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 hCG_1984214I3L0E3 225 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 KCNK3O14649 394 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 RAD51CO43502 376 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 ZEB2O60315 1214 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 RSPH10BP0C881 870 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 TCP10Q12799 353 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 PRR16Q569H4 304 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 ZNF571Q7Z3V5 609 aaPredicted RBP19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 RPAINQ86UA6 219 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 ZNF713Q8N859 430 aaPredicted RBP19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 PCDHA1Q9Y5I3 950 aa19.88■□□□□ 0.77
ARFGAP1-209ENST00000518794 MYBP10242 640 aa19.87■□□□□ 0.77
ARFGAP1-209ENST00000518794 KCNA1Q09470 495 aa19.87■□□□□ 0.77
ARFGAP1-209ENST00000518794 NNTQ13423 1086 aa19.87■□□□□ 0.77
ARFGAP1-209ENST00000518794 MEI1Q5TIA1 1274 aa19.87■□□□□ 0.77
ARFGAP1-209ENST00000518794 DDX42Q86XP3 938 aaKnown RBP eCLIP19.87■□□□□ 0.77
ARFGAP1-209ENST00000518794 IFT20Q8IY31 132 aa19.87■□□□□ 0.77
ARFGAP1-209ENST00000518794 AP1M1Q9BXS5 423 aa19.87■□□□□ 0.77
ARFGAP1-209ENST00000518794 HDAC9Q9UKV0 1011 aa19.87■□□□□ 0.77
ARFGAP1-209ENST00000518794 GOLGA8KD6RF30 607 aa19.87■□□□□ 0.77
ARFGAP1-209ENST00000518794 TCERG1LQ5VWI1 586 aa19.87■□□□□ 0.77
ARFGAP1-209ENST00000518794 INPP4AQ96PE3 977 aaPredicted RBP19.87■□□□□ 0.77
ARFGAP1-209ENST00000518794 GDF3Q9NR23 364 aa19.87■□□□□ 0.77
ARFGAP1-209ENST00000518794 SFI1A8K8P3 1242 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 EIF3HO15372 352 aaKnown RBP eCLIP19.86■□□□□ 0.772e-12■■■□□ 18
ARFGAP1-209ENST00000518794 OPA1O60313 960 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 USH1GQ495M9 461 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 SFR1Q86XK3 245 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 CATSPER3Q86XQ3 398 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 SLF2Q8IX21 1173 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 PIK3R5Q8WYR1 880 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 CAVIN3Q969G5 261 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 JPH2Q9BR39 696 aaPredicted RBP19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 BTAF1O14981 1849 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 HOXD13P35453 343 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 SLC12A3P55017 1021 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 CFAP58Q5T655 872 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 CEP63Q96MT8 703 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 ANO3Q9BYT9 981 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 EDEM3Q9BZQ6 932 aa19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 ATF5Q9Y2D1 282 aaPredicted RBP19.86■□□□□ 0.77
ARFGAP1-209ENST00000518794 CLIC2O15247 247 aa19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 CASP4P49662 377 aa19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 GUCY1A3Q02108 690 aa19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 CRY2Q49AN0 593 aa19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 RBM46Q8TBY0 533 aaKnown RBP19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 RBM17Q96I25 401 aaKnown RBP19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 SPAG5Q96R06 1193 aa19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 NT5C3AQ9H0P0 336 aa19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 DHX36Q9H2U1 1008 aaKnown RBP19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 CENPHQ9H3R5 247 aa19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 PCDHGC5Q9Y5F6 944 aa19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 POLD1P28340 1107 aa19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 LRCH2Q5VUJ6 765 aa19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 OR2W6PQ8NHA6 318 aa19.85■□□□□ 0.77
ARFGAP1-209ENST00000518794 TBC1D22AQ8WUA7 517 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms