RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 SRRDQ9UH36 339 aa6.74□□□□□ -1.33
CSMD1-203ENST00000518151 SRPK3Q9UPE1 567 aa6.74□□□□□ -1.33
CSMD1-203ENST00000518151 TRAF6Q9Y4K3 522 aa6.74□□□□□ -1.33
CSMD1-203ENST00000518151 ASXL2Q76L83 1435 aa6.74□□□□□ -1.33
CSMD1-203ENST00000518151 ADCY3O60266 1144 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 ATP2B1P20020 1258 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 CSF2RBP32927 897 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 ST5P78524 1137 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 DBPQ10586 325 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-203ENST00000518151 USP10Q14694 798 aaKnown RBP6.73□□□□□ -1.33
CSMD1-203ENST00000518151 FIGNQ5HY92 759 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 ARHGAP36Q6ZRI8 547 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 SPATC1Q76KD6 591 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 ZBTB38Q8NAP3 1195 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-203ENST00000518151 LMF1Q96S06 567 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 CARD11Q9BXL7 1154 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 CD244Q9BZW8 370 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 CATSPERZQ9NTU4 200 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 SIRPGQ9P1W8 387 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 ARHGAP28Q9P2N2 729 aa6.73□□□□□ -1.33
CSMD1-203ENST00000518151 ACOT7O00154 380 aa6.72□□□□□ -1.33
CSMD1-203ENST00000518151 ZNF623O75123 536 aa6.72□□□□□ -1.33
CSMD1-203ENST00000518151 CNOT4O95628 575 aaKnown RBP6.72□□□□□ -1.33
CSMD1-203ENST00000518151 PTPN1P18031 435 aaKnown RBP6.72□□□□□ -1.33
CSMD1-203ENST00000518151 POLD1P28340 1107 aa6.72□□□□□ -1.33
CSMD1-203ENST00000518151 GABREP78334 506 aa6.72□□□□□ -1.33
CSMD1-203ENST00000518151 GUCY1A3Q02108 690 aa6.72□□□□□ -1.33
CSMD1-203ENST00000518151 LONRF2Q1L5Z9 754 aa6.72□□□□□ -1.33
CSMD1-203ENST00000518151 NAALADL2Q58DX5 795 aa6.72□□□□□ -1.33
CSMD1-203ENST00000518151 FAM47CQ5HY64 1035 aa6.72□□□□□ -1.33
CSMD1-203ENST00000518151 ZNF585AQ6P3V2 769 aa6.72□□□□□ -1.33
CSMD1-203ENST00000518151 TACO1Q9BSH4 297 aaKnown RBP6.72□□□□□ -1.33
CSMD1-203ENST00000518151 RIC8BQ9NVN3 520 aa6.72□□□□□ -1.33
CSMD1-203ENST00000518151 ATP23Q9Y6H3 246 aa6.72□□□□□ -1.33
CSMD1-203ENST00000518151 MUSKO15146 869 aa6.71□□□□□ -1.34
CSMD1-203ENST00000518151 CDSNQ15517 529 aa6.71□□□□□ -1.34
CSMD1-203ENST00000518151 CRY1Q16526 586 aa6.71□□□□□ -1.34
CSMD1-203ENST00000518151 ZC3H12BQ5HYM0 836 aaKnown RBP6.71□□□□□ -1.34
CSMD1-203ENST00000518151 C16orf59Q7L2K0 433 aa6.71□□□□□ -1.34
CSMD1-203ENST00000518151 SH3RF2Q8TEC5 729 aa6.71□□□□□ -1.34
CSMD1-203ENST00000518151 PTPN18Q99952 460 aa6.71□□□□□ -1.34
CSMD1-203ENST00000518151 HIRIP3Q9BW71 556 aaPredicted RBP6.71□□□□□ -1.34
CSMD1-203ENST00000518151 TANGO6Q9C0B7 1094 aa6.71□□□□□ -1.34
CSMD1-203ENST00000518151 PFDN2Q9UHV9 154 aa6.71□□□□□ -1.34
CSMD1-203ENST00000518151 CCDC85CA6NKD9 419 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 ARVCFO00192 962 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 AKAP8O43823 692 aaKnown RBP6.7□□□□□ -1.34
CSMD1-203ENST00000518151 IL18BPO95998 194 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 C6P13671 934 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 TACR2P21452 398 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 ZMAT1Q5H9K5 638 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 USP51Q70EK9 711 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 GPR155Q7Z3F1 870 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 SPRED1Q7Z699 444 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 GIMAP8Q8ND71 665 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-203ENST00000518151 PCDH19Q8TAB3 1148 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 SLC39A2Q9NP94 309 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 FBXO10Q9UK96 956 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 TESMINQ9Y4I5 508 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 PCDHA8Q9Y5H6 950 aa6.7□□□□□ -1.34
CSMD1-203ENST00000518151 TCRBV5S4A2TA0A5A2 114 aa6.69□□□□□ -1.34
CSMD1-203ENST00000518151 PDE6AP16499 860 aa6.69□□□□□ -1.34
CSMD1-203ENST00000518151 GDF5P43026 501 aa6.69□□□□□ -1.34
CSMD1-203ENST00000518151 RAC3P60763 192 aa6.69□□□□□ -1.34
CSMD1-203ENST00000518151 FAM209AQ5JX71 171 aa6.69□□□□□ -1.34
CSMD1-203ENST00000518151 CXXC5Q7LFL8 322 aaKnown RBP6.69□□□□□ -1.34
CSMD1-203ENST00000518151 LRP10Q7Z4F1 713 aa6.69□□□□□ -1.34
CSMD1-203ENST00000518151 PALM2Q8IXS6 379 aa6.69□□□□□ -1.34
CSMD1-203ENST00000518151 SCYL1Q96KG9 808 aa6.69□□□□□ -1.34
CSMD1-203ENST00000518151 LRRC37BQ96QE4 947 aa6.69□□□□□ -1.34
CSMD1-203ENST00000518151 DHRS4Q9BTZ2 278 aa6.69□□□□□ -1.34
CSMD1-203ENST00000518151 ESYT3A0FGR9 886 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 FAM90A27PA6NNH2 459 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 MAN2B1O00754 1011 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 FSHBP01225 129 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 C6orf222P0C671 652 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-203ENST00000518151 PYGMP11217 842 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 KRT15P19012 456 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 PTGS1P23219 599 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 HERVK_113P62684 666 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 WDR72Q3MJ13 1102 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 PTRH1Q86Y79 214 aaKnown RBP6.68□□□□□ -1.34
CSMD1-203ENST00000518151 ZC3H7AQ8IWR0 971 aaKnown RBP6.68□□□□□ -1.34
CSMD1-203ENST00000518151 SLC16A11Q8NCK7 471 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 WDR48Q8TAF3 677 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 Q8TCH9 128 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 ARMC5Q96C12 935 aa6.68□□□□□ -1.34
CSMD1-203ENST00000518151 NEIL1Q96FI4 390 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-203ENST00000518151 EFCAB14O75071 495 aa6.67□□□□□ -1.34
CSMD1-203ENST00000518151 CLASP2O75122 1294 aaKnown RBP6.67□□□□□ -1.34
CSMD1-203ENST00000518151 ETV4P43268 484 aa6.67□□□□□ -1.34
CSMD1-203ENST00000518151 TOP3AQ13472 1001 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-203ENST00000518151 R3HDM1Q15032 1099 aaKnown RBP6.67□□□□□ -1.34
CSMD1-203ENST00000518151 TCTN3Q6NUS6 607 aa6.67□□□□□ -1.34
CSMD1-203ENST00000518151 CRIP3Q6Q6R5 217 aa6.67□□□□□ -1.34
CSMD1-203ENST00000518151 OSTM1Q86WC4 334 aa6.67□□□□□ -1.34
CSMD1-203ENST00000518151 WWC2-AS2Q96NR7 200 aa6.67□□□□□ -1.34
CSMD1-203ENST00000518151 GNRHR2Q96P88 292 aa6.67□□□□□ -1.34
CSMD1-203ENST00000518151 VPS11Q9H270 941 aa6.67□□□□□ -1.34
CSMD1-203ENST00000518151 MSL2Q9HCI7 577 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms