RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 CNTN2Q02246 1040 aa10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 BAATQ14032 418 aaPredicted RBP10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 PTPN21Q16825 1174 aa10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 NSMFQ6X4W1 530 aa10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 SLC30A10Q6XR72 485 aa10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 FAM177A1Q8N128 213 aaPredicted RBP10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 DNERQ8NFT8 737 aa10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 SP7Q8TDD2 431 aaPredicted RBP10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 MSLNLQ96KJ4 702 aa10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 RPGRIP1Q96KN7 1286 aa10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 RNF26Q9BY78 433 aaPredicted RBP10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 ADD3Q9UEY8 706 aaKnown RBP10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 TPCN1Q9ULQ1 816 aa10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 PCDHGC5Q9Y5F6 944 aa10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 SIP14410 1827 aa10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 USP24Q9UPU5 2620 aa10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 PTPRSQ13332 1948 aa10.76□□□□□ -0.69
CSNK1A1-206ENST00000515748 PTPDC1A2A3K4 754 aa10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 PRPF3O43395 683 aaKnown RBP10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 NBNO60934 754 aa10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 MYL3P08590 195 aa10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 PFKFB3Q16875 520 aaPredicted RBP10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 TAPT1Q6NXT6 567 aa10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 NFRKBQ6P4R8 1299 aa10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 CMTR1Q8N1G2 835 aaKnown RBP10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 SYTL5Q8TDW5 730 aaPredicted RBP10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 AFAP1L1Q8TED9 768 aa10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 MTG1Q9BT17 334 aaPredicted RBP10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 NOD1Q9Y239 953 aa10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 FRMPD4Q14CM0 1322 aa10.75□□□□□ -0.69
CSNK1A1-206ENST00000515748 ESYT2A0FGR8 921 aa10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 CDKL5O76039 1030 aa10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 PARNO95453 639 aaKnown RBP10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 LMNAP02545 664 aaKnown RBP10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 SELPP16109 830 aa10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 ALDH5A1P51649 535 aaPredicted RBP10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 PTPN11Q06124 597 aaPredicted RBP10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 RSPO4Q2I0M5 234 aaPredicted RBP10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 WWC2Q6AWC2 1192 aa10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 CCDC155Q8N6L0 562 aa10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 GTF3C6Q969F1 213 aa10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 CHAMP1Q96JM3 812 aa10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 MPHOSPH6Q99547 160 aaKnown RBP10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 PHF7Q9BWX1 381 aaPredicted RBP10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 GLT8D2Q9H1C3 349 aa10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 NCOA5Q9HCD5 579 aaKnown RBP10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 BARHL2Q9NY43 387 aa10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 NAP1L2Q9ULW6 460 aaPredicted RBP10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 V9GY48 417 aaPredicted RBP10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 STK36Q9NRP7 1315 aa10.74□□□□□ -0.69
CSNK1A1-206ENST00000515748 FAM208BQ5VWN6 2430 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 B4DLN1 442 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 GCOM1H8Y6P7 765 aaPredicted RBP10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 RBAK-RBAKDNI3L0D1 243 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 CPLX1O14810 134 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 POLR2MP0CAP2 368 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 SCG2P13521 617 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 HOXB3P14651 431 aaPredicted RBP10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 CALML3P27482 149 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 NDUFV1P49821 464 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 MRPL12P52815 198 aaKnown RBP10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 SCRN1Q12765 414 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 PTGISQ16647 500 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 ASTLQ6HA08 431 aaPredicted RBP10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 CPLX2Q6PUV4 134 aaKnown RBP10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 LRRC8DQ7L1W4 858 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 EEPD1Q7L9B9 569 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 HEATR3Q7Z4Q2 680 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 TRIM22Q8IYM9 498 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 CCDC82Q8N4S0 544 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 SMRP1Q8NCR6 262 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 CAGE1Q8TC20 777 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 NSUN6Q8TEA1 469 aaKnown RBP10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 IWS1Q96ST2 819 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 SLKQ9H2G2 1235 aaPredicted RBP10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 SEMA4AQ9H3S1 761 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 VTA1Q9NP79 307 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 CLEC1BQ9P126 229 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 COL20A1Q9P218 1284 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 LIMCH1Q9UPQ0 1083 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 DDX49Q9Y6V7 483 aaKnown RBP10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 MCM3APO60318 1980 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 FRYLO94915 3013 aa10.73□□□□□ -0.69
CSNK1A1-206ENST00000515748 SETXQ7Z333 2677 aaKnown RBP10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 GPR179Q6PRD1 2367 aa10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 MEIS2O14770 477 aa10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 GRM6O15303 877 aa10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 CFBP00751 764 aa10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 AMHP03971 560 aa10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 CCT2P78371 535 aaKnown RBP10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 COASYQ13057 564 aa10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 ME3Q16798 604 aa10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 TYW1BQ6NUM6 668 aa10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 ZBTB33Q86T24 672 aa10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 CCDC12Q8WUD4 166 aaPredicted RBP10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 PIBF1Q8WXW3 757 aa10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 TBC1D5Q92609 795 aa10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 GPKOWQ92917 476 aaPredicted RBP eCLIP10.72□□□□□ -0.69
CSNK1A1-206ENST00000515748 PHKBQ93100 1093 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms