RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 RINT1Q6NUQ1 792 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 CYFIP1Q7L576 1253 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 RASAL3Q86YV0 1011 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 NACC1Q96RE7 527 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 REEP2Q9BRK0 252 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 MROH8Q9H579 483 aa10.19□□□□□ -0.78
CPNE4-213ENST00000515418 ADD3Q9UEY8 706 aaKnown RBP10.19□□□□□ -0.78
CPNE4-213ENST00000515418 DNAJC25-GNG10A0A024R161 153 aa10.18□□□□□ -0.78
CPNE4-213ENST00000515418 IGF2BP3O00425 579 aaKnown RBP eCLIP10.18□□□□□ -0.78
CPNE4-213ENST00000515418 MAFGO15525 162 aa10.18□□□□□ -0.78
CPNE4-213ENST00000515418 QARSP47897 775 aaKnown RBP10.18□□□□□ -0.78
CPNE4-213ENST00000515418 UBASH3AP57075 661 aa10.18□□□□□ -0.78
CPNE4-213ENST00000515418 TPD52L1Q16890 204 aaPredicted RBP10.18□□□□□ -0.78
CPNE4-213ENST00000515418 GNPTABQ3T906 1256 aa10.18□□□□□ -0.78
CPNE4-213ENST00000515418 CT47A1Q5JQC4 288 aaPredicted RBP10.18□□□□□ -0.78
CPNE4-213ENST00000515418 UTP14CQ5TAP6 766 aaKnown RBP10.18□□□□□ -0.78
CPNE4-213ENST00000515418 RGMBQ6NW40 437 aa10.18□□□□□ -0.78
CPNE4-213ENST00000515418 C1orf186Q6ZWK4 172 aa10.18□□□□□ -0.78
CPNE4-213ENST00000515418 MAEAQ7L5Y9 396 aa10.18□□□□□ -0.78
CPNE4-213ENST00000515418 MAF1Q9H063 256 aa10.18□□□□□ -0.78
CPNE4-213ENST00000515418 SEMA6BQ9H3T3 888 aa10.18□□□□□ -0.78
CPNE4-213ENST00000515418 SLC45A1Q9Y2W3 748 aa10.18□□□□□ -0.78
CPNE4-213ENST00000515418 PASKQ96RG2 1323 aa10.18□□□□□ -0.78
CPNE4-213ENST00000515418 WDR64B1ANS9 1081 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 EDNRBP24530 442 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 KRT76Q01546 638 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 GRM1Q13255 1194 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 STIM1Q13586 685 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 LY6KQ17RY6 165 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 CCDC144BQ3MJ40 725 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 TMEM63BQ5T3F8 832 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 SWSAP1Q6NVH7 229 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 CCDC65Q8IXS2 484 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 MRFAP1L1Q96HT8 127 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 ZIC5Q96T25 663 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 DUSP9Q99956 384 aaKnown RBP10.17□□□□□ -0.78
CPNE4-213ENST00000515418 SRRTQ9BXP5 876 aaKnown RBP10.17□□□□□ -0.78
CPNE4-213ENST00000515418 ZSWIM4Q9H7M6 989 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 TCEAL9Q9UHQ7 104 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 CPA4Q9UI42 421 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 PCDHA2Q9Y5H9 948 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 MYH9P35579 1960 aaKnown RBP10.17□□□□□ -0.78
CPNE4-213ENST00000515418 KIF3CO14782 793 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 PSMA7O14818 248 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 STAM2O75886 525 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 PTGS1P23219 599 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 GCLCP48506 637 aaPredicted RBP10.17□□□□□ -0.78
CPNE4-213ENST00000515418 NPEPPSP55786 919 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 FAM26FQ5R3K3 315 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 CDKAL1Q5VV42 579 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 TTI2Q6NXR4 508 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 CCDC186Q7Z3E2 898 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 IRF2BP1Q8IU81 584 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 SHCBP1Q8NEM2 672 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 P2RX5Q93086 422 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 DHTKD1Q96HY7 919 aaPredicted RBP10.17□□□□□ -0.78
CPNE4-213ENST00000515418 CDHR1Q96JP9 859 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 JPH1Q9HDC5 661 aaPredicted RBP10.17□□□□□ -0.78
CPNE4-213ENST00000515418 INTS13Q9NVM9 706 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 GABBR1Q9UBS5 961 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 SLC9A2Q9UBY0 812 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 PCDHA10Q9Y5I2 948 aa10.17□□□□□ -0.78
CPNE4-213ENST00000515418 MYH11P35749 1972 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 ZNF862O60290 1169 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 ADORA2AP29274 412 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 YWHABP31946 246 aaKnown RBP10.16□□□□□ -0.78
CPNE4-213ENST00000515418 ICAM3P32942 547 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 COPB2P35606 906 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 CASP5P51878 434 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 JAK3P52333 1124 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 ACTR2P61160 394 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 CCNA1P78396 465 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 PSMD2Q13200 908 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 ARID5BQ14865 1188 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 PLA2G4FQ68DD2 849 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 ZNF746Q6NUN9 644 aaPredicted RBP10.16□□□□□ -0.78
CPNE4-213ENST00000515418 APTXQ7Z2E3 356 aaKnown RBP10.16□□□□□ -0.78
CPNE4-213ENST00000515418 FILIP1Q7Z7B0 1213 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 SFR1Q86XK3 245 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 FBXO16Q8IX29 292 aaPredicted RBP10.16□□□□□ -0.78
CPNE4-213ENST00000515418 NELFCDQ8IXH7 590 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 PARK7Q99497 189 aaKnown RBP10.16□□□□□ -0.78
CPNE4-213ENST00000515418 PDGFCQ9NRA1 345 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 MORF4L1Q9UBU8 362 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 ABT1Q9ULW3 272 aaKnown RBP10.16□□□□□ -0.78
CPNE4-213ENST00000515418 NFASCO94856 1347 aa10.16□□□□□ -0.78
CPNE4-213ENST00000515418 FRMD3A2A2Y4 597 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 ARHGEF35A5YM69 484 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 NKRFO15226 690 aaKnown RBP eCLIP10.15□□□□□ -0.78
CPNE4-213ENST00000515418 TEX33O43247 280 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 ARIH2O95376 493 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 MUTP22033 750 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 UBA1P22314 1058 aaKnown RBP10.15□□□□□ -0.78
CPNE4-213ENST00000515418 CCNE1P24864 410 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 SFNP31947 248 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 PSMC5P62195 406 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 CENPPQ6IPU0 288 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 PADI6Q6TGC4 694 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 ABHD15Q6UXT9 468 aa10.15□□□□□ -0.78
CPNE4-213ENST00000515418 ANO5Q75V66 913 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms