RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 IGSF9BQ9UPX0 1349 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 LGALS2P05162 132 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 CAPN2P17655 700 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 MUTP22033 750 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 CMA1P23946 247 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 TXLNAP40222 546 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 QARSP47897 775 aaKnown RBP23.54■■□□□ 1.36
LSM6-207ENST00000515311 SLC26A2P50443 739 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 BEX3Q00994 111 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 LRRC41Q15345 812 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 SWSAP1Q6NVH7 229 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 PCSK9Q8NBP7 692 aaKnown RBP23.54■■□□□ 1.36
LSM6-207ENST00000515311 ATP6V0A1Q93050 837 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 CRISPLD2Q9H0B8 497 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 AZI2Q9H6S1 392 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 ZNF302Q9NR11 478 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 OGDHLQ9ULD0 1010 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 KDM3AQ9Y4C1 1321 aa23.54■■□□□ 1.36
LSM6-207ENST00000515311 GOLGA6L4A6NEF3 574 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 GOLGA6L22H0YM25 854 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 BACH1O14867 736 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 DKC1O60832 514 aaKnown RBP eCLIP23.53■■□□□ 1.36
LSM6-207ENST00000515311 SLITRK3O94933 977 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 SPATA31C1P0DKV0 1188 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 CDC25AP30304 524 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 CCT6AP40227 531 aaKnown RBP23.53■■□□□ 1.36
LSM6-207ENST00000515311 PSMC5P62195 406 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 IRX5P78411 483 aaPredicted RBP23.53■■□□□ 1.36
LSM6-207ENST00000515311 SPECC1Q5M775 1068 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 CCSAPQ6IQ19 270 aaPredicted RBP23.53■■□□□ 1.36
LSM6-207ENST00000515311 PLPPR4Q7Z2D5 763 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 CABP7Q86V35 215 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 DYDC2Q96IM9 177 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 EPSTI1Q96J88 318 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 PCYT2Q99447 389 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 TSEN34Q9BSV6 310 aaKnown RBP23.53■■□□□ 1.36
LSM6-207ENST00000515311 SMARCAD1Q9H4L7 1026 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 RGL1Q9NZL6 768 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 GABBR1Q9UBS5 961 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 MAFBQ9Y5Q3 323 aaPredicted RBP23.53■■□□□ 1.36
LSM6-207ENST00000515311 LOXHD1Q8IVV2 1947 aa23.53■■□□□ 1.36
LSM6-207ENST00000515311 MED24O75448 989 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 SGPL1O95470 568 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 F2P00734 622 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 STAT5BP51692 787 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 PURAQ00577 322 aaKnown RBP23.52■■□□□ 1.36
LSM6-207ENST00000515311 CYP4A11Q02928 519 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 HYIQ5T013 277 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 USP49Q70CQ1 688 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 CATSPER3Q86XQ3 398 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 KCTD17Q8N5Z5 321 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 BANK1Q8NDB2 785 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 GLG1Q92896 1179 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 LXNQ9BS40 222 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 C16orf70Q9BSU1 422 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 ZSWIM4Q9H7M6 989 aa23.52■■□□□ 1.36
LSM6-207ENST00000515311 ZNF215Q9UL58 517 aaPredicted RBP23.52■■□□□ 1.36
LSM6-207ENST00000515311 LYPLA2O95372 231 aa23.51■■□□□ 1.35
LSM6-207ENST00000515311 ZNF286BP0CG31 522 aa23.51■■□□□ 1.35
LSM6-207ENST00000515311 KCNA10Q16322 511 aa23.51■■□□□ 1.35
LSM6-207ENST00000515311 UGCGQ16739 394 aa23.51■■□□□ 1.35
LSM6-207ENST00000515311 UTP14CQ5TAP6 766 aaKnown RBP23.51■■□□□ 1.35
LSM6-207ENST00000515311 PDXDC2PQ6P474 469 aa23.51■■□□□ 1.35
LSM6-207ENST00000515311 TRIM50Q86XT4 487 aa23.51■■□□□ 1.35
LSM6-207ENST00000515311 U2AF1L4Q8WU68 220 aaKnown RBP23.51■■□□□ 1.35
LSM6-207ENST00000515311 CALML4Q96GE6 196 aa23.51■■□□□ 1.35
LSM6-207ENST00000515311 NT5C3AQ9H0P0 336 aa23.51■■□□□ 1.35
LSM6-207ENST00000515311 FAM13BQ9NYF5 915 aa23.51■■□□□ 1.35
LSM6-207ENST00000515311 ERAP1Q9NZ08 941 aa23.51■■□□□ 1.35
LSM6-207ENST00000515311 FAM237AA0A1B0GTK4 181 aa23.5■■□□□ 1.35
LSM6-207ENST00000515311 MOXD2PA6NHM9 499 aa23.5■■□□□ 1.35
LSM6-207ENST00000515311 DNM1LO00429 736 aa23.5■■□□□ 1.35
LSM6-207ENST00000515311 PRPF40AO75400 957 aaKnown RBP23.5■■□□□ 1.35
LSM6-207ENST00000515311 MYL3P08590 195 aa23.5■■□□□ 1.35
LSM6-207ENST00000515311 GJA8P48165 433 aa23.5■■□□□ 1.35
LSM6-207ENST00000515311 UBE2HP62256 183 aa23.5■■□□□ 1.35
LSM6-207ENST00000515311 CTTNQ14247 550 aaKnown RBP23.5■■□□□ 1.35
LSM6-207ENST00000515311 TPH2Q8IWU9 490 aa23.5■■□□□ 1.35
LSM6-207ENST00000515311 C4orf19Q8IY42 314 aa23.5■■□□□ 1.35
LSM6-207ENST00000515311 MRPS27Q92552 414 aaKnown RBP23.5■■□□□ 1.35
LSM6-207ENST00000515311 CDK5RAP3Q96JB5 506 aa23.5■■□□□ 1.35
LSM6-207ENST00000515311 MTG1Q9BT17 334 aaPredicted RBP23.5■■□□□ 1.35
LSM6-207ENST00000515311 TMEM106CQ9BVX2 250 aa23.5■■□□□ 1.35
LSM6-207ENST00000515311 CCDC39Q9UFE4 941 aa23.5■■□□□ 1.35
LSM6-207ENST00000515311 SCN10AQ9Y5Y9 1956 aa23.5■■□□□ 1.35
LSM6-207ENST00000515311 POTEB3A0JP26 581 aa23.49■■□□□ 1.35
LSM6-207ENST00000515311 KBTBD13C9JR72 458 aa23.49■■□□□ 1.35
LSM6-207ENST00000515311 H3BRB1 525 aa23.49■■□□□ 1.35
LSM6-207ENST00000515311 ZNF862O60290 1169 aa23.49■■□□□ 1.35
LSM6-207ENST00000515311 CABYRO75952 493 aa23.49■■□□□ 1.35
LSM6-207ENST00000515311 ASGR1P07306 291 aa23.49■■□□□ 1.35
LSM6-207ENST00000515311 ACLYP53396 1101 aa23.49■■□□□ 1.35
LSM6-207ENST00000515311 TMEM119Q4V9L6 283 aa23.49■■□□□ 1.35
LSM6-207ENST00000515311 POTEBQ6S5H4 581 aa23.49■■□□□ 1.35
LSM6-207ENST00000515311 POTEGQ6S5H5 508 aa23.49■■□□□ 1.35
LSM6-207ENST00000515311 FAM167AQ96KS9 214 aa23.49■■□□□ 1.35
LSM6-207ENST00000515311 KATNAL1Q9BW62 490 aa23.49■■□□□ 1.35
LSM6-207ENST00000515311 TUT1Q9H6E5 874 aaKnown RBP23.49■■□□□ 1.35
LSM6-207ENST00000515311 WRAP73Q9P2S5 460 aaPredicted RBP23.49■■□□□ 1.35
LSM6-207ENST00000515311 HPSEQ9Y251 543 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms