RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 DISC1Q9NRI5 854 aa15.76■□□□□ 0.11
USP46-209ENST00000514536 PCDHA10Q9Y5I2 948 aa15.76■□□□□ 0.11
USP46-209ENST00000514536 DNAH12Q6ZR08 3092 aa15.76■□□□□ 0.11
USP46-209ENST00000514536 TBX3O15119 743 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 PSAPP07602 524 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 FAM160B1Q5W0V3 765 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 CCDC60Q8IWA6 550 aaPredicted RBP15.75■□□□□ 0.11
USP46-209ENST00000514536 SMAP1Q8IYB5 467 aaPredicted RBP15.75■□□□□ 0.11
USP46-209ENST00000514536 HAS1Q92839 578 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 INTS4Q96HW7 963 aaKnown RBP15.75■□□□□ 0.11
USP46-209ENST00000514536 NOC4LQ9BVI4 516 aaKnown RBP15.75■□□□□ 0.11
USP46-209ENST00000514536 ZNF302Q9NR11 478 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 UMODL1Q5DID0 1318 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 WDR64B1ANS9 1081 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 BAG4O95429 457 aaKnown RBP15.75■□□□□ 0.11
USP46-209ENST00000514536 MCM7P33993 719 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 CCL23P55773 120 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 PLCB4Q15147 1175 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 ZNF174Q15697 407 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 PDXDC2PQ6P474 469 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 MIER3Q7Z3K6 550 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 AFAP1L1Q8TED9 768 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 ATP6V0A1Q93050 837 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 GABBR1Q9UBS5 961 aa15.75■□□□□ 0.11
USP46-209ENST00000514536 TREHO43280 583 aa15.74■□□□□ 0.11
USP46-209ENST00000514536 GNAT1P11488 350 aa15.74■□□□□ 0.11
USP46-209ENST00000514536 SFNP31947 248 aa15.74■□□□□ 0.11
USP46-209ENST00000514536 JAK3P52333 1124 aa15.74■□□□□ 0.11
USP46-209ENST00000514536 PPFIA1Q13136 1202 aa15.74■□□□□ 0.11
USP46-209ENST00000514536 CALCRLQ16602 461 aa15.74■□□□□ 0.11
USP46-209ENST00000514536 MFSD5Q6N075 450 aa15.74■□□□□ 0.11
USP46-209ENST00000514536 B3GNT9Q6UX72 402 aa15.74■□□□□ 0.11
USP46-209ENST00000514536 DHX38Q92620 1227 aaKnown RBP15.74■□□□□ 0.11
USP46-209ENST00000514536 UBE2OQ9C0C9 1292 aaKnown RBP15.74■□□□□ 0.11
USP46-209ENST00000514536 NOL7Q9UMY1 257 aaKnown RBP15.74■□□□□ 0.11
USP46-209ENST00000514536 TRPC6Q9Y210 931 aa15.74■□□□□ 0.11
USP46-209ENST00000514536 SZT2Q5T011 3432 aa15.74■□□□□ 0.11
USP46-209ENST00000514536 POTEB3A0JP26 581 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 NEMFO60524 1076 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 INSRRP14616 1297 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 ATP4AP20648 1035 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 HOXC8P31273 242 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 SLC26A2P50443 739 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 PTK7Q13308 1070 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 GRIK4Q16099 956 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 TTC38Q5R3I4 469 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 POTEBQ6S5H4 581 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 TRMT1LQ7Z2T5 733 aaKnown RBP15.73■□□□□ 0.11
USP46-209ENST00000514536 CKAP2LQ8IYA6 745 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 SLFN12Q8IYM2 578 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 RETREG2Q8NC44 543 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 LMBR1Q8WVP7 490 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 TMEM60Q9H2L4 133 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 VAV3Q9UKW4 847 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 MAFBQ9Y5Q3 323 aaPredicted RBP15.73■□□□□ 0.11
USP46-209ENST00000514536 NRCAMQ92823 1304 aa15.73■□□□□ 0.11
USP46-209ENST00000514536 EML1O00423 815 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 PDCP20941 246 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 BMP8BP34820 402 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 TXKP42681 527 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 TRAPPC10P48553 1259 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 TOB1P50616 345 aaPredicted RBP15.72■□□□□ 0.11
USP46-209ENST00000514536 IGBP1P78318 339 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 ADAM17P78536 824 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 FPGSQ05932 587 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 PPP2R5CQ13362 524 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 BFSP2Q13515 415 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 NBR1Q14596 966 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 SERINC5Q86VE9 423 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 TMEM199Q8N511 208 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 RDM1Q8NG50 284 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 TNPO1Q92973 898 aaKnown RBP15.72■□□□□ 0.11
USP46-209ENST00000514536 WNT8BQ93098 351 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 MTMR9Q96QG7 549 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 WNT8AQ9H1J5 351 aa15.72■□□□□ 0.11
USP46-209ENST00000514536 VPS37CA5D8V6 355 aaPredicted RBP15.71■□□□□ 0.11
USP46-209ENST00000514536 HBP1O60381 514 aa15.71■□□□□ 0.11
USP46-209ENST00000514536 CSF2RAP15509 400 aa15.71■□□□□ 0.11
USP46-209ENST00000514536 CCDC155Q8N6L0 562 aa15.71■□□□□ 0.11
USP46-209ENST00000514536 ATP8B4Q8TF62 1192 aa15.71■□□□□ 0.11
USP46-209ENST00000514536 SCLYQ96I15 445 aa15.71■□□□□ 0.11
USP46-209ENST00000514536 TTC12Q9H892 705 aaPredicted RBP15.71■□□□□ 0.11
USP46-209ENST00000514536 PCDHA12Q9UN75 941 aa15.71■□□□□ 0.11
USP46-209ENST00000514536 RRN3P2A6NIE6 340 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 HSP90AA1P07900 732 aaKnown RBP15.7■□□□□ 0.1
USP46-209ENST00000514536 SYT1P21579 422 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 EPHB4P54760 987 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 UGCGQ16739 394 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 TRIM71Q2Q1W2 868 aaKnown RBP15.7■□□□□ 0.1
USP46-209ENST00000514536 MARCH8Q5T0T0 291 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 NCAPH2Q6IBW4 605 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 CAGE1Q8TC20 777 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 TRAPPC12Q8WVT3 735 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 ZBTB10Q96DT7 871 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 PCDHB6Q9Y5E3 794 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 PITPNM1O00562 1244 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 ZNF862O60290 1169 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 IQCF3P0C7M6 154 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 ACRP10323 421 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 CKBP12277 381 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms