RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 HSPA14Q0VDF9 509 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 SMAD4Q13485 552 aaKnown RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 CYLC2Q14093 348 aaPredicted RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 SQLEQ14534 574 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 GFOD2Q3B7J2 385 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 CFAP100Q494V2 611 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 DACT2Q5SW24 774 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 KANK4Q5T7N3 995 aaPredicted RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 RNASEH2BQ5TBB1 312 aaKnown RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 PHLDB3Q6NSJ2 640 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 SHQ1Q6PI26 577 aaKnown RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 CWC27Q6UX04 472 aaKnown RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 PI16Q6UXB8 463 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 C4orf50Q6ZRC1 276 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 FAM196AQ6ZSG2 479 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 CAPN12Q6ZSI9 719 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 KRT27Q7Z3Y8 459 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 ZNF554Q86TJ5 538 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 VPS36Q86VN1 386 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 DGKHQ86XP1 1220 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 ST13P4Q8IZP2 240 aaPredicted RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 CAMKK1Q8N5S9 505 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 LSMEM1Q8N8F7 131 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 SCAIQ8N9R8 606 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 ANKRD53Q8N9V6 530 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 XXYLT1Q8NBI6 393 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 EHBP1Q8NDI1 1231 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 SHCBP1Q8NEM2 672 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 OR6C4Q8NGE1 309 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 GOT1L1Q8NHS2 421 aaPredicted RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 OTUD7AQ8TE49 926 aaPredicted RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 DDI1Q8WTU0 396 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 BCL7CQ8WUZ0 217 aaPredicted RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 IFT81Q8WYA0 676 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 GFM2Q969S9 779 aaKnown RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 FAM161BQ96MY7 647 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 JAKMIP1Q96N16 626 aaKnown RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 TSNARE1Q96NA8 513 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 RUNDC3BQ96NL0 473 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 ASB16Q96NS5 453 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 MNTQ99583 582 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 SMAD5Q99717 465 aaKnown RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 ELAC2Q9BQ52 826 aaKnown RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 KIFC3Q9BVG8 833 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 CCDC106Q9BWC9 280 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 AGXT2Q9BYV1 514 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 YIPF3Q9GZM5 350 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 NDEL1Q9GZM8 345 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 INTS2Q9H0H0 1204 aaKnown RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 NT5C3AQ9H0P0 336 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 MROH8Q9H579 483 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 SCPEP1Q9HB40 452 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 NCOA5Q9HCD5 579 aaKnown RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 CNGB3Q9NQW8 809 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 ANO10Q9NW15 660 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 NKIRAS2Q9NYR9 191 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.33□□□□□ -1.72
AFP-205ENST00000513720 RTEL1Q9NZ71 1219 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 NFKBIL1Q9UBC1 381 aaPredicted RBP4.33□□□□□ -1.72
AFP-205ENST00000513720 TEKT2Q9UIF3 430 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 DDX19BQ9UMR2 479 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 NUDCQ9Y266 331 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 CFL2Q9Y281 166 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 ZBTB1Q9Y2K1 713 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 MED16Q9Y2X0 877 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 CBY1Q9Y3M2 126 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 TSC22D4Q9Y3Q8 395 aa4.33□□□□□ -1.72
AFP-205ENST00000513720 ZMYM3Q14202 1370 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 ESYT3A0FGR9 886 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 WDR91A4D1P6 747 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 LRRIQ4A6NIV6 560 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 SNTNA6NMZ2 147 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 VSTM5A8MXK1 200 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 B4DLN1 442 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 F5H423 210 aaPredicted RBP4.32□□□□□ -1.72
AFP-205ENST00000513720 TNFRSF10AO00220 468 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 MAPK13O15264 365 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 SIN3BO75182 1162 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 MICAL2O94851 1124 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 POLR3DP05423 398 aaPredicted RBP4.32□□□□□ -1.72
AFP-205ENST00000513720 APOA4P06727 396 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 KRT7P08729 469 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 FDX1P10109 184 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 ALAS1P13196 640 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 HPGDP15428 266 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 ALAS2P22557 587 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 SERPINB3P29508 390 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 ALDH3A1P30838 453 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 HOXC12P31275 282 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 SOX6P35712 828 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 PSMC2P35998 433 aaKnown RBP4.32□□□□□ -1.72
AFP-205ENST00000513720 ETFBP38117 255 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 RFC5P40937 340 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 CBX5P45973 191 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 PHKA1P46020 1223 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 GPC3P51654 580 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 ATN1P54259 1190 aaPredicted RBP4.32□□□□□ -1.72
AFP-205ENST00000513720 GSDMDP57764 484 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 ZNF445P59923 1031 aa4.32□□□□□ -1.72
AFP-205ENST00000513720 EIF4A1P60842 406 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms