RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 CSTF1Q05048 431 aaKnown RBP11.11□□□□□ -0.63
CLCN3-208ENST00000512813 APOBRQ0VD83 1088 aa11.11□□□□□ -0.63
CLCN3-208ENST00000512813 LAMC2Q13753 1193 aa11.11□□□□□ -0.63
CLCN3-208ENST00000512813 LAIR1Q6GTX8 287 aa11.11□□□□□ -0.63
CLCN3-208ENST00000512813 CCDC149Q6ZUS6 474 aa11.11□□□□□ -0.63
CLCN3-208ENST00000512813 ENTPD7Q9NQZ7 604 aa11.11□□□□□ -0.63
CLCN3-208ENST00000512813 SEMA4GQ9NTN9 838 aa11.11□□□□□ -0.63
CLCN3-208ENST00000512813 DZANK1Q9NVP4 752 aa11.11□□□□□ -0.63
CLCN3-208ENST00000512813 SPATA6Q9NWH7 488 aaPredicted RBP11.11□□□□□ -0.63
CLCN3-208ENST00000512813 LOXHD1Q8IVV2 1947 aa11.11□□□□□ -0.63
CLCN3-208ENST00000512813 TM4SF5O14894 197 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 GDF9O60383 454 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 FOXD2O60548 495 aaPredicted RBP11.1□□□□□ -0.63
CLCN3-208ENST00000512813 MBD4O95243 580 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 CHRNA1P02708 482 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 RETP07949 1114 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 STAG3L1P0CL83 205 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 SMIM10L2AP0DMW4 78 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 SMIM10L2BP0DMW5 78 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 SRFP11831 508 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 SLC1A4P43007 532 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 LIMK1P53667 647 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 RPS6P62753 249 aaKnown RBP11.1□□□□□ -0.63
CLCN3-208ENST00000512813 LPIN1Q14693 890 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 TTF1Q15361 905 aaPredicted RBP11.1□□□□□ -0.63
CLCN3-208ENST00000512813 CSRP2Q16527 193 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 CTR9Q6PD62 1173 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 SEPT14Q6ZU15 432 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 THNSL1Q8IYQ7 743 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 CLEC4DQ8WXI8 215 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 ZCCHC14Q8WYQ9 949 aaKnown RBP11.1□□□□□ -0.63
CLCN3-208ENST00000512813 MAP4K1Q92918 833 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 DDRGK1Q96HY6 314 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 FOXQ1Q9C009 403 aa11.1□□□□□ -0.63
CLCN3-208ENST00000512813 DDX41Q9UJV9 622 aaKnown RBP11.1□□□□□ -0.63
CLCN3-208ENST00000512813 PNMA6EA0A0J9YXQ4 647 aa11.09□□□□□ -0.63
CLCN3-208ENST00000512813 LRRN2O75325 713 aa11.09□□□□□ -0.63
CLCN3-208ENST00000512813 GNAI3P08754 354 aa11.09□□□□□ -0.63
CLCN3-208ENST00000512813 GATMP50440 423 aa11.09□□□□□ -0.63
CLCN3-208ENST00000512813 PLCB3Q01970 1234 aa11.09□□□□□ -0.63
CLCN3-208ENST00000512813 NONOQ15233 471 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLCN3-208ENST00000512813 C12orf76Q8N812 135 aaPredicted RBP11.09□□□□□ -0.63
CLCN3-208ENST00000512813 COLGALT1Q8NBJ5 622 aa11.09□□□□□ -0.63
CLCN3-208ENST00000512813 MRPS27Q92552 414 aaKnown RBP11.09□□□□□ -0.63
CLCN3-208ENST00000512813 GATA6Q92908 595 aa11.09□□□□□ -0.63
CLCN3-208ENST00000512813 C16orf70Q9BSU1 422 aa11.09□□□□□ -0.63
CLCN3-208ENST00000512813 ADAM33Q9BZ11 813 aa11.09□□□□□ -0.63
CLCN3-208ENST00000512813 RANBP17Q9H2T7 1088 aaKnown RBP11.09□□□□□ -0.63
CLCN3-208ENST00000512813 RNPEPQ9H4A4 650 aa11.09□□□□□ -0.63
CLCN3-208ENST00000512813 PRKRIP1Q9H875 184 aaPredicted RBP11.09□□□□□ -0.63
CLCN3-208ENST00000512813 MKNK2Q9HBH9 465 aa11.09□□□□□ -0.63
CLCN3-208ENST00000512813 ARPP21Q9UBL0 812 aaPredicted RBP11.09□□□□□ -0.63
CLCN3-208ENST00000512813 RAB23Q9ULC3 237 aa11.09□□□□□ -0.63
CLCN3-208ENST00000512813 PLIN4Q96Q06 1357 aa11.08□□□□□ -0.64
CLCN3-208ENST00000512813 MGAT3Q09327 533 aa11.08□□□□□ -0.64
CLCN3-208ENST00000512813 SPOUT1Q5T280 376 aaKnown RBP11.08□□□□□ -0.64
CLCN3-208ENST00000512813 KCTD1Q719H9 257 aa11.08□□□□□ -0.64
CLCN3-208ENST00000512813 ADAM32Q8TC27 787 aa11.08□□□□□ -0.64
CLCN3-208ENST00000512813 GPR152Q8TDT2 470 aa11.08□□□□□ -0.64
CLCN3-208ENST00000512813 BCO2Q9BYV7 579 aa11.08□□□□□ -0.64
CLCN3-208ENST00000512813 SMC4Q9NTJ3 1288 aa11.08□□□□□ -0.64
CLCN3-208ENST00000512813 WASF3Q9UPY6 502 aa11.08□□□□□ -0.64
CLCN3-208ENST00000512813 SALL2Q9Y467 1007 aaPredicted RBP11.08□□□□□ -0.64
CLCN3-208ENST00000512813 LAMA5O15230 3695 aa11.08□□□□□ -0.64
CLCN3-208ENST00000512813 NRCAMQ92823 1304 aa11.08□□□□□ -0.64
CLCN3-208ENST00000512813 FNDC1Q4ZHG4 1894 aaPredicted RBP11.07□□□□□ -0.64
CLCN3-208ENST00000512813 KALRNO60229 2985 aa11.07□□□□□ -0.64
CLCN3-208ENST00000512813 CLASP2O75122 1294 aaKnown RBP11.07□□□□□ -0.64
CLCN3-208ENST00000512813 GNAT1P11488 350 aa11.07□□□□□ -0.64
CLCN3-208ENST00000512813 SCG2P13521 617 aa11.07□□□□□ -0.64
CLCN3-208ENST00000512813 MCCP23508 829 aa11.07□□□□□ -0.64
CLCN3-208ENST00000512813 STARD6P59095 220 aa11.07□□□□□ -0.64
CLCN3-208ENST00000512813 DCLRE1AQ6PJP8 1040 aa11.07□□□□□ -0.64
CLCN3-208ENST00000512813 TSHZ1Q6ZSZ6 1077 aa11.07□□□□□ -0.64
CLCN3-208ENST00000512813 RTN4RL1Q86UN2 441 aaPredicted RBP11.07□□□□□ -0.64
CLCN3-208ENST00000512813 RSAD2Q8WXG1 361 aa11.07□□□□□ -0.64
CLCN3-208ENST00000512813 FTHL17Q9BXU8 183 aa11.07□□□□□ -0.64
CLCN3-208ENST00000512813 FAM126AQ9BYI3 521 aaPredicted RBP11.07□□□□□ -0.64
CLCN3-208ENST00000512813 CCDC8Q9H0W5 538 aaPredicted RBP11.07□□□□□ -0.64
CLCN3-208ENST00000512813 RXFP3Q9NSD7 469 aa11.07□□□□□ -0.64
CLCN3-208ENST00000512813 PUF60Q9UHX1 559 aaKnown RBP11.07□□□□□ -0.64
CLCN3-208ENST00000512813 ADAMTS20P59510 1910 aa11.07□□□□□ -0.64
CLCN3-208ENST00000512813 SPTA1P02549 2419 aa11.07□□□□□ -0.64
CLCN3-208ENST00000512813 FREM2Q5SZK8 3169 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 C2orf71A6NGG8 1288 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 H3BRB1 525 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 KCNK5O95279 499 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 MAGEA9P43362 315 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 ADAM17P78536 824 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 ATP8B2P98198 1209 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 OS9Q13438 667 aaPredicted RBP11.06□□□□□ -0.64
CLCN3-208ENST00000512813 HSDL1Q3SXM5 330 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 FBXO47Q5MNV8 452 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 RCSD1Q6JBY9 416 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 KANK3Q6NY19 840 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 PDZD3Q86UT5 571 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 SLC44A3Q8N4M1 653 aa11.06□□□□□ -0.64
CLCN3-208ENST00000512813 MRPL43Q8N983 215 aaKnown RBP11.06□□□□□ -0.64
CLCN3-208ENST00000512813 EAF2Q96CJ1 260 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms