RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 MARCH8Q5T0T0 291 aa11.96□□□□□ -0.49
DDX41-211ENST00000510171 IER5Q5VY09 327 aa11.96□□□□□ -0.49
DDX41-211ENST00000510171 HFE2Q6ZVN8 426 aa11.96□□□□□ -0.49
DDX41-211ENST00000510171 TNPO1Q92973 898 aaKnown RBP11.96□□□□□ -0.49
DDX41-211ENST00000510171 PPP2R3CQ969Q6 453 aa11.96□□□□□ -0.49
DDX41-211ENST00000510171 AGO3Q9H9G7 860 aaKnown RBP11.96□□□□□ -0.49
DDX41-211ENST00000510171 RC3H2Q9HBD1 1191 aaKnown RBP11.96□□□□□ -0.49
DDX41-211ENST00000510171 ALG13Q9NP73 1137 aaKnown RBP11.96□□□□□ -0.49
DDX41-211ENST00000510171 CD207Q9UJ71 328 aa11.96□□□□□ -0.49
DDX41-211ENST00000510171 TAF6LQ9Y6J9 622 aa11.96□□□□□ -0.49
DDX41-211ENST00000510171 KIAA1217Q5T5P2 1943 aa11.96□□□□□ -0.5
DDX41-211ENST00000510171 COL4A6Q14031 1691 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 MAFGO15525 162 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 LINC01565O15544 149 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 DDAH1O94760 285 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 GSPT1P15170 499 aaKnown RBP11.95□□□□□ -0.5
DDX41-211ENST00000510171 CHMLP26374 656 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 CD52P31358 61 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 NDUFV1P49821 464 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 ANTXR2P58335 489 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 IGBP1P78318 339 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 MRPS6P82932 125 aaKnown RBP11.95□□□□□ -0.5
DDX41-211ENST00000510171 NHLH1Q02575 133 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 HERC4Q5GLZ8 1057 aaPredicted RBP11.95□□□□□ -0.5
DDX41-211ENST00000510171 TTC22Q5TAA0 569 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 RTN4RL1Q86UN2 441 aaPredicted RBP11.95□□□□□ -0.5
DDX41-211ENST00000510171 RNF135Q8IUD6 432 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 NPAS4Q8IUM7 802 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 CMTR2Q8IYT2 770 aaKnown RBP11.95□□□□□ -0.5
DDX41-211ENST00000510171 ZNF654Q8IZM8 581 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 TMTC2Q8N394 836 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 P2RX5Q93086 422 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 MYL10Q9BUA6 226 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 FTHL17Q9BXU8 183 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 JADE2Q9NQC1 790 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 PKD2L1Q9P0L9 805 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 MUTYHQ9UIF7 546 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 UBIAD1Q9Y5Z9 338 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 SQORQ9Y6N5 450 aa11.95□□□□□ -0.5
DDX41-211ENST00000510171 M0QZ92 97 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 TBX10O75333 385 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 STAG3L1P0CL83 205 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 INSRRP14616 1297 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 CAMK1Q14012 370 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 CASC1Q6TDU7 716 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 NFXL1Q6ZNB6 911 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 MB21D2Q8IYB1 491 aaPredicted RBP11.94□□□□□ -0.5
DDX41-211ENST00000510171 SRBD1Q8N5C6 995 aaKnown RBP11.94□□□□□ -0.5
DDX41-211ENST00000510171 SPPL3Q8TCT6 385 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 LINC01599Q8WXQ3 324 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 EDAQ92838 391 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 ZBTB10Q96DT7 871 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 MTA3Q9BTC8 594 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 FAM49AQ9H0Q0 323 aaPredicted RBP11.94□□□□□ -0.5
DDX41-211ENST00000510171 AZI2Q9H6S1 392 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 LY9Q9HBG7 655 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 PCDHA6Q9UN73 950 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 PCDHA8Q9Y5H6 950 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 TRPV2Q9Y5S1 764 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 MRPL42Q9Y6G3 142 aaKnown RBP11.94□□□□□ -0.5
DDX41-211ENST00000510171 LAMA4Q16363 1823 aa11.94□□□□□ -0.5
DDX41-211ENST00000510171 SIP14410 1827 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 SPDYE3A6NKU9 549 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 SGSM2O43147 1006 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 PLEKHA8P1O95397 391 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 EYA4O95677 639 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 ITGB1P05556 798 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 DNAJB1P25685 340 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 PDE4AP27815 886 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 CMTR1Q8N1G2 835 aaKnown RBP11.93□□□□□ -0.5
DDX41-211ENST00000510171 CRIPAKQ8N1N5 446 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 EFHBQ8N7U6 833 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 KLHL23Q8NBE8 558 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 MAP4K1Q92918 833 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 MSLNLQ96KJ4 702 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 CELF4Q9BZC1 486 aaKnown RBP11.93□□□□□ -0.5
DDX41-211ENST00000510171 JPH1Q9HDC5 661 aaPredicted RBP11.93□□□□□ -0.5
DDX41-211ENST00000510171 LRFN2Q9ULH4 789 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 PADI3Q9ULW8 664 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 PCDHA2Q9Y5H9 948 aa11.93□□□□□ -0.5
DDX41-211ENST00000510171 BRWD1Q9NSI6 2320 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 CCDC69A6NI79 296 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 PRC1O43663 620 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 CALM1P0DP23 149 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 CALM2P0DP24 149 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 CALM3P0DP25 149 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 TMEM62Q0P6H9 643 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 PAK2Q13177 524 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 UBE2SQ16763 222 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 PAN2Q504Q3 1202 aaKnown RBP11.92□□□□□ -0.5
DDX41-211ENST00000510171 PLPPR4Q7Z2D5 763 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 RBM23Q86U06 439 aaKnown RBP11.92□□□□□ -0.5
DDX41-211ENST00000510171 NME8Q8N427 588 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 POF1BQ8WVV4 589 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 TMEM87BQ96K49 555 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 PCYT2Q99447 389 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 SDF4Q9BRK5 362 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 CLEC1BQ9P126 229 aa11.92□□□□□ -0.5
DDX41-211ENST00000510171 SLC9A2Q9UBY0 812 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms