RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ZSCAN31Q96LW9 406 aaPredicted RBP15.39■□□□□ 0.05
SNF8-206ENST00000509989 UNC45AQ9H3U1 944 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 EMSYQ7Z589 1322 aa15.39■□□□□ 0.05
SNF8-206ENST00000509989 CCDC194A0A1B0GVG4 234 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 KIF28PB7ZC32 967 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 CHMP2AO43633 222 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 NBNO60934 754 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 INSRRP14616 1297 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 KRT2P35908 639 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 IGBP1P78318 339 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 PTK7Q13308 1070 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 PPIGQ13427 754 aaKnown RBP eCLIP15.38■□□□□ 0.053e-7■■□□□ 12
SNF8-206ENST00000509989 LRIT3Q3SXY7 679 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 Q4G0T1 1027 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 RASIP1Q5U651 963 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 SWSAP1Q6NVH7 229 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 OTOP2Q7RTS6 562 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 ETNPPLQ8TBG4 499 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 RNPC3Q96LT9 517 aaKnown RBP15.38■□□□□ 0.05
SNF8-206ENST00000509989 MICAL3Q7RTP6 2002 aa15.38■□□□□ 0.05
SNF8-206ENST00000509989 PSMD10O75832 226 aa15.37■□□□□ 0.05
SNF8-206ENST00000509989 CTSHP09668 335 aa15.37■□□□□ 0.05
SNF8-206ENST00000509989 STAT5BP51692 787 aa15.37■□□□□ 0.05
SNF8-206ENST00000509989 SETQ01105 290 aaPredicted RBP15.37■□□□□ 0.05
SNF8-206ENST00000509989 GRIK4Q16099 956 aa15.37■□□□□ 0.05
SNF8-206ENST00000509989 B3GNT9Q6UX72 402 aa15.37■□□□□ 0.05
SNF8-206ENST00000509989 POTEDQ86YR6 584 aa15.37■□□□□ 0.05
SNF8-206ENST00000509989 WASF1Q92558 559 aa15.37■□□□□ 0.05
SNF8-206ENST00000509989 HAS1Q92839 578 aa15.37■□□□□ 0.05
SNF8-206ENST00000509989 SMARCAD1Q9H4L7 1026 aa15.37■□□□□ 0.05
SNF8-206ENST00000509989 SH2B1Q9NRF2 756 aaPredicted RBP15.37■□□□□ 0.05
SNF8-206ENST00000509989 ERAP1Q9NZ08 941 aa15.37■□□□□ 0.05
SNF8-206ENST00000509989 TMEM150BA6NC51 233 aa15.36■□□□□ 0.05
SNF8-206ENST00000509989 ZBTB42B2RXF5 422 aa15.36■□□□□ 0.05
SNF8-206ENST00000509989 EML1O00423 815 aa15.36■□□□□ 0.05
SNF8-206ENST00000509989 PITPNM1O00562 1244 aa15.36■□□□□ 0.05
SNF8-206ENST00000509989 ZNF862O60290 1169 aa15.36■□□□□ 0.05
SNF8-206ENST00000509989 THPOP40225 353 aa15.36■□□□□ 0.05
SNF8-206ENST00000509989 PBX2P40425 430 aa15.36■□□□□ 0.05
SNF8-206ENST00000509989 RBL2Q08999 1139 aa15.36■□□□□ 0.05
SNF8-206ENST00000509989 PPFIA1Q13136 1202 aa15.36■□□□□ 0.05
SNF8-206ENST00000509989 LRCH2Q5VUJ6 765 aa15.36■□□□□ 0.05
SNF8-206ENST00000509989 LRRC8DQ7L1W4 858 aa15.36■□□□□ 0.05
SNF8-206ENST00000509989 TMCO2Q7Z6W1 182 aaPredicted RBP15.36■□□□□ 0.05
SNF8-206ENST00000509989 NEK8Q86SG6 692 aa15.36■□□□□ 0.05
SNF8-206ENST00000509989 FAM177A1Q8N128 213 aaPredicted RBP15.36■□□□□ 0.05
SNF8-206ENST00000509989 LLPHQ9BRT6 129 aaKnown RBP15.36■□□□□ 0.05
SNF8-206ENST00000509989 UPF2Q9HAU5 1272 aaKnown RBP15.36■□□□□ 0.05
SNF8-206ENST00000509989 DDX25Q9UHL0 483 aaKnown RBP15.36■□□□□ 0.05
SNF8-206ENST00000509989 ZNF215Q9UL58 517 aaPredicted RBP15.36■□□□□ 0.05
SNF8-206ENST00000509989 BACH1O14867 736 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 ST18O60284 1047 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 CCNT1O60563 726 aaKnown RBP15.35■□□□□ 0.05
SNF8-206ENST00000509989 FGBP02675 491 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 SELPP16109 830 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 XBP1P17861 261 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 BFSP2Q13515 415 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 PLPPR4Q7Z2D5 763 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 RETREG2Q8NC44 543 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 AFAP1L1Q8TED9 768 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 C8orf76Q96K31 380 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 KCNMB3Q9NPA1 279 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 ZNF302Q9NR11 478 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 TBC1D22BQ9NU19 505 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 GABBR1Q9UBS5 961 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 VAV3Q9UKW4 847 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 TRPC6Q9Y210 931 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 ARID2Q68CP9 1835 aa15.35■□□□□ 0.05
SNF8-206ENST00000509989 POTEB3A0JP26 581 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 MBLAC1A4D2B0 266 aaPredicted RBP15.34■□□□□ 0.05
SNF8-206ENST00000509989 GAS7O60861 476 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 STBD1O95210 358 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 ATP2B1P20020 1258 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 TMEM62Q0P6H9 643 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 NBR1Q14596 966 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 ZNF746Q6NUN9 644 aaPredicted RBP15.34■□□□□ 0.05
SNF8-206ENST00000509989 MIS18BP1Q6P0N0 1132 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 PDXDC2PQ6P474 469 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 POTEBQ6S5H4 581 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 MOXD1Q6UVY6 613 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 FBXO18Q8NFZ0 1043 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 CAGE1Q8TC20 777 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 DNAJB3Q8WWF6 145 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 HERVK_113Q902F9 699 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 RIT2Q99578 217 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 SH2D3AQ9BRG2 576 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 TEKT3Q9BXF9 490 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 TMEM60Q9H2L4 133 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 AZI2Q9H6S1 392 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 DISC1Q9NRI5 854 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 MAFBQ9Y5Q3 323 aaPredicted RBP15.34■□□□□ 0.05
SNF8-206ENST00000509989 MYO9BQ13459 2157 aa15.34■□□□□ 0.05
SNF8-206ENST00000509989 CHRNA1P02708 482 aa15.33■□□□□ 0.04
SNF8-206ENST00000509989 MYOGP15173 224 aa15.33■□□□□ 0.04
SNF8-206ENST00000509989 RABGGTBP53611 331 aa15.33■□□□□ 0.04
SNF8-206ENST00000509989 KRT76Q01546 638 aa15.33■□□□□ 0.04
SNF8-206ENST00000509989 PPP4R3AQ6IN85 833 aa15.33■□□□□ 0.04
SNF8-206ENST00000509989 FAM161BQ96MY7 647 aa15.33■□□□□ 0.04
SNF8-206ENST00000509989 FAM49AQ9H0Q0 323 aaPredicted RBP15.33■□□□□ 0.04
SNF8-206ENST00000509989 WRAP73Q9P2S5 460 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms