RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 EHMT1Q9H9B1 1298 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 ERAP1Q9NZ08 941 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 PKD2L1Q9P0L9 805 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 SEC63Q9UGP8 760 aaKnown RBP11.92□□□□□ -0.5
MBD4-208ENST00000509828 PCDHB12Q9Y5F1 795 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 MRPL42Q9Y6G3 142 aaKnown RBP11.92□□□□□ -0.5
MBD4-208ENST00000509828 MICAL3Q7RTP6 2002 aa11.92□□□□□ -0.5
MBD4-208ENST00000509828 ITGB1P05556 798 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 SRGAP2BP0DMP2 458 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 MRPS6P82932 125 aaKnown RBP11.91□□□□□ -0.5
MBD4-208ENST00000509828 HDAC1Q13547 482 aaPredicted RBP11.91□□□□□ -0.5
MBD4-208ENST00000509828 WTAPQ15007 396 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 FBXO47Q5MNV8 452 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 PCNX4Q63HM2 1172 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 NPAS4Q8IUM7 802 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 SPPL3Q8TCT6 385 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 ZNF689Q96CS4 500 aaPredicted RBP11.91□□□□□ -0.5
MBD4-208ENST00000509828 RRP36Q96EU6 259 aaKnown RBP11.91□□□□□ -0.5
MBD4-208ENST00000509828 CDHR1Q96JP9 859 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 SMARCAD1Q9H4L7 1026 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 AZI2Q9H6S1 392 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 RIOX1Q9H6W3 641 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 AAASQ9NRG9 546 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 BARX2Q9UMQ3 279 aaPredicted RBP11.91□□□□□ -0.5
MBD4-208ENST00000509828 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
MBD4-208ENST00000509828 USP15Q9Y4E8 981 aaPredicted RBP11.91□□□□□ -0.5
MBD4-208ENST00000509828 RRN3P2A6NIE6 340 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 GFRA3O60609 400 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 EYA4O95677 639 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 SCG2P13521 617 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 ADAM17P78536 824 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 SIGLEC14Q08ET2 396 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 TMEM62Q0P6H9 643 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 COASYQ13057 564 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 PAK2Q13177 524 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 SEMA3FQ13275 785 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 SEC23AQ15436 765 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 USP17L6PQ6QN14 398 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 CYB5R4Q7L1T6 521 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 ADGRD2Q7Z7M1 963 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 PHF7Q9BWX1 381 aaPredicted RBP11.9□□□□□ -0.5
MBD4-208ENST00000509828 FAM86C1Q9NVL1 165 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.5
MBD4-208ENST00000509828 CLEC1BQ9P126 229 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 TELO2Q9Y4R8 837 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 PCDHB7Q9Y5E2 793 aa11.9□□□□□ -0.5
MBD4-208ENST00000509828 LOC730098B7Z3J9 87 aa11.89□□□□□ -0.51
MBD4-208ENST00000509828 PER2O15055 1255 aa11.89□□□□□ -0.51
MBD4-208ENST00000509828 DNAJB1P25685 340 aa11.89□□□□□ -0.51
MBD4-208ENST00000509828 MGAT3Q09327 533 aa11.89□□□□□ -0.51
MBD4-208ENST00000509828 NFX1Q12986 1120 aaKnown RBP11.89□□□□□ -0.51
MBD4-208ENST00000509828 THNSL1Q8IYQ7 743 aa11.89□□□□□ -0.51
MBD4-208ENST00000509828 SMRP1Q8NCR6 262 aa11.89□□□□□ -0.51
MBD4-208ENST00000509828 CTCFLQ8NI51 663 aaPredicted RBP11.89□□□□□ -0.51
MBD4-208ENST00000509828 GPRASP2Q96D09 838 aa11.89□□□□□ -0.51
MBD4-208ENST00000509828 MSLNLQ96KJ4 702 aa11.89□□□□□ -0.51
MBD4-208ENST00000509828 NEK1Q96PY6 1258 aa11.89□□□□□ -0.51
MBD4-208ENST00000509828 AGO3Q9H9G7 860 aaKnown RBP11.89□□□□□ -0.51
MBD4-208ENST00000509828 RC3H2Q9HBD1 1191 aaKnown RBP11.89□□□□□ -0.51
MBD4-208ENST00000509828 GINS2Q9Y248 185 aa11.89□□□□□ -0.51
MBD4-208ENST00000509828 TRPV2Q9Y5S1 764 aa11.89□□□□□ -0.51
MBD4-208ENST00000509828 U3KPZ7 1027 aaPredicted RBP11.89□□□□□ -0.51
MBD4-208ENST00000509828 COL4A6Q14031 1691 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 GSTTP1A0A1W2PQM5 241 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 FSD2A1L4K1 749 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 DENND3A2RUS2 1198 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 LINC00271P0C7V0 271 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 INSRRP14616 1297 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 KIF5BP33176 963 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 MTMR1Q13613 665 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 CAMK1Q14012 370 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 CHD1LQ86WJ1 897 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 PLEKHM2Q8IWE5 1019 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 PSTPIP2Q9H939 334 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 TMEM260Q9NX78 707 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 PUF60Q9UHX1 559 aaKnown RBP11.88□□□□□ -0.51
MBD4-208ENST00000509828 PADI3Q9ULW8 664 aa11.88□□□□□ -0.51
MBD4-208ENST00000509828 SPDYE3A6NKU9 549 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 TBKBP1A7MCY6 615 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 CYTH3O43739 400 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 ATP9AO75110 1047 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 AVPR2P30518 371 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 GATMP50440 423 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 KRT76Q01546 638 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 SLC35G1Q2M3R5 365 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 ODR4Q5SWX8 454 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 NFXL1Q6ZNB6 911 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 RTN4RL1Q86UN2 441 aaPredicted RBP11.87□□□□□ -0.51
MBD4-208ENST00000509828 NCOA7Q8NI08 942 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 RUFY2Q8WXA3 655 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 ZBTB10Q96DT7 871 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 CDCA3Q99618 268 aaPredicted RBP11.87□□□□□ -0.51
MBD4-208ENST00000509828 APOL5Q9BWW9 433 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 CELF4Q9BZC1 486 aaKnown RBP11.87□□□□□ -0.51
MBD4-208ENST00000509828 TLR9Q9NR96 1032 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 PCDHGC5Q9Y5F6 944 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 SQORQ9Y6N5 450 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 MYH6P13533 1939 aa11.87□□□□□ -0.51
MBD4-208ENST00000509828 FRMPD4Q14CM0 1322 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms