RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SH3RF3Q8TEJ3 882 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-211ENST00000508531 DCAF4Q8WV16 495 aa6.07□□□□□ -1.44
PDLIM5-211ENST00000508531 SGSM3Q96HU1 749 aa6.07□□□□□ -1.44
PDLIM5-211ENST00000508531 EPRSP07814 1512 aaKnown RBP6.07□□□□□ -1.44
PDLIM5-211ENST00000508531 ABCC2Q92887 1545 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 NKRFO15226 690 aaKnown RBP eCLIP6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 KLF4O43474 513 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 AKAP8O43823 692 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 RAPGEF3O95398 923 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 CKMP06732 381 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 FGFR1P11362 822 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 GNAT1P11488 350 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 PABPC1P11940 636 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 FAHP16930 419 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 GLRBP48167 497 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 CDSNQ15517 529 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 PAN2Q504Q3 1202 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 SPRED1Q7Z699 444 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 KISS1RQ969F8 398 aaPredicted RBP6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 OSBP2Q969R2 916 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 CD248Q9HCU0 757 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 TELO2Q9Y4R8 837 aa6.06□□□□□ -1.44
PDLIM5-211ENST00000508531 IQCA1LA6NCM1 817 aa6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 KLHL18O94889 574 aa6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 FBXO21O94952 628 aa6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 GPR85P60893 370 aa6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 SPIRE1Q08AE8 756 aa6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 SMAD2Q15796 467 aaKnown RBP6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 SKIDA1Q1XH10 827 aa6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 YOD1Q5VVQ6 348 aaPredicted RBP6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 ZNF585AQ6P3V2 769 aa6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 NSMFQ6X4W1 530 aa6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 KLC2Q9H0B6 622 aa6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 ZFP69BQ9UJL9 534 aa6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 ADAM29Q9UKF5 820 aa6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 TSC22D4Q9Y3Q8 395 aa6.05□□□□□ -1.44
PDLIM5-211ENST00000508531 FSHBP01225 129 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 SOD2P04179 222 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 IFRD2Q12894 506 aaPredicted RBP6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 CD276Q5ZPR3 534 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 SLFN13Q68D06 897 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 STYK1Q6J9G0 422 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 PALM2Q8IXS6 379 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 IFNL3Q8IZI9 196 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 STPG3Q8N7X2 389 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 SLC43A3Q8NBI5 491 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 GMLQ99445 158 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 ZFYVE21Q9BQ24 234 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 MEGF9Q9H1U4 602 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 DEF6Q9H4E7 631 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 ARHGAP20Q9P2F6 1191 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 DSEQ9UL01 958 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 NUB1Q9Y5A7 615 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 CUL7Q14999 1698 aa6.04□□□□□ -1.44
PDLIM5-211ENST00000508531 MAP3K4Q9Y6R4 1608 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 CD109Q6YHK3 1445 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 TRAV20A0A0B4J274 112 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 KNG1P01042 644 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 ENO2P09104 434 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 PFKPQ01813 784 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 HABP4Q5JVS0 413 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 Q6ZUG5 572 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 GPR155Q7Z3F1 870 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 RALYLQ86SE5 291 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 SLC16A11Q8NCK7 471 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 ST13P5Q8NFI4 369 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 DNERQ8NFT8 737 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 IPPKQ9H8X2 491 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 KCND1Q9NSA2 647 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 ADAMTSL3P82987 1691 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 RUSC2Q8N2Y8 1516 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 TNIKQ9UKE5 1360 aa6.03□□□□□ -1.44
PDLIM5-211ENST00000508531 FAM47E-STBD1D6RA91 191 aa6.02□□□□□ -1.45
PDLIM5-211ENST00000508531 C6P13671 934 aa6.02□□□□□ -1.45
PDLIM5-211ENST00000508531 RAB33AQ14088 237 aa6.02□□□□□ -1.45
PDLIM5-211ENST00000508531 KCTD1Q719H9 257 aa6.02□□□□□ -1.45
PDLIM5-211ENST00000508531 LRRC47Q8N1G4 583 aaKnown RBP6.02□□□□□ -1.45
PDLIM5-211ENST00000508531 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.02□□□□□ -1.45
PDLIM5-211ENST00000508531 CDK5RAP1Q96SZ6 601 aaKnown RBP6.02□□□□□ -1.45
PDLIM5-211ENST00000508531 CD244Q9BZW8 370 aa6.02□□□□□ -1.45
PDLIM5-211ENST00000508531 SRRDQ9UH36 339 aa6.02□□□□□ -1.45
PDLIM5-211ENST00000508531 NOP58Q9Y2X3 529 aaKnown RBP6.02□□□□□ -1.45
PDLIM5-211ENST00000508531 TRAF6Q9Y4K3 522 aa6.02□□□□□ -1.45
PDLIM5-211ENST00000508531 UACAQ9BZF9 1416 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 ERICH3Q5RHP9 1530 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 ZNF839A8K0R7 811 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 PATE3B3GLJ2 98 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 ACOT7O00154 380 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 CNOT4O95628 575 aaKnown RBP6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 IL18BPO95998 194 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 CHGBP05060 677 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 CSF2RBP32927 897 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 EPHA5P54756 1037 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 AJUBAQ96IF1 538 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 WWC2-AS2Q96NR7 200 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 TACO1Q9BSH4 297 aaKnown RBP6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 TRIM55Q9BYV6 548 aa6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 PDGFDQ9GZP0 370 aaPredicted RBP6.01□□□□□ -1.45
PDLIM5-211ENST00000508531 SCAND2PQ9GZW5 306 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms