RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 CUTAO60888 179 aa7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 GJB6O95452 261 aa7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 GNAT1P11488 350 aa7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 CR2P20023 1033 aa7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 MCM7P33993 719 aa7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 DUSP8Q13202 625 aa7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 KIZQ2M2Z5 673 aa7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 LSM12Q3MHD2 195 aaKnown RBP7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 MAMDC4Q6UXC1 1216 aa7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 POLNQ7Z5Q5 900 aa7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 IKZF4Q9H2S9 585 aa7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 DSEQ9UL01 958 aa7.07□□□□□ -1.28
TRAPPC13-209ENST00000508304 SSBP05455 408 aaKnown RBP eCLIP7.06□□□□□ -1.28
TRAPPC13-209ENST00000508304 KCTD1Q719H9 257 aa7.06□□□□□ -1.28
TRAPPC13-209ENST00000508304 CEP89Q96ST8 783 aa7.06□□□□□ -1.28
TRAPPC13-209ENST00000508304 TRIM8Q9BZR9 551 aa7.06□□□□□ -1.28
TRAPPC13-209ENST00000508304 MATN2O00339 956 aa7.05□□□□□ -1.28
TRAPPC13-209ENST00000508304 ETFBP38117 255 aa7.05□□□□□ -1.28
TRAPPC13-209ENST00000508304 DCAF4Q8WV16 495 aa7.05□□□□□ -1.28
TRAPPC13-209ENST00000508304 MRRFQ96E11 262 aaKnown RBP7.05□□□□□ -1.28
TRAPPC13-209ENST00000508304 KCNJ15Q99712 375 aa7.05□□□□□ -1.28
TRAPPC13-209ENST00000508304 DPYSL5Q9BPU6 564 aa7.05□□□□□ -1.28
TRAPPC13-209ENST00000508304 ZFYVE21Q9BQ24 234 aa7.05□□□□□ -1.28
TRAPPC13-209ENST00000508304 PODXL2Q9NZ53 605 aa7.05□□□□□ -1.28
TRAPPC13-209ENST00000508304 C1SP09871 688 aa7.04□□□□□ -1.28
TRAPPC13-209ENST00000508304 ZMAT1Q5H9K5 638 aa7.04□□□□□ -1.28
TRAPPC13-209ENST00000508304 KCNT2Q6UVM3 1135 aa7.04□□□□□ -1.28
TRAPPC13-209ENST00000508304 C1orf210Q8IVY1 113 aa7.04□□□□□ -1.28
TRAPPC13-209ENST00000508304 IL17DQ8TAD2 202 aa7.04□□□□□ -1.28
TRAPPC13-209ENST00000508304 CACTINQ8WUQ7 758 aaKnown RBP7.04□□□□□ -1.28
TRAPPC13-209ENST00000508304 FAM89AQ96GI7 184 aa7.04□□□□□ -1.28
TRAPPC13-209ENST00000508304 CAPN10Q9HC96 672 aa7.04□□□□□ -1.28
TRAPPC13-209ENST00000508304 SLC39A2Q9NP94 309 aa7.04□□□□□ -1.28
TRAPPC13-209ENST00000508304 ESYT3A0FGR9 886 aa7.03□□□□□ -1.28
TRAPPC13-209ENST00000508304 CDC14BO60729 498 aa7.03□□□□□ -1.28
TRAPPC13-209ENST00000508304 TGM1P22735 817 aa7.03□□□□□ -1.28
TRAPPC13-209ENST00000508304 ETV4P43268 484 aa7.03□□□□□ -1.28
TRAPPC13-209ENST00000508304 DBPQ10586 325 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-209ENST00000508304 NOLC1Q14978 699 aaKnown RBP eCLIP7.03□□□□□ -1.28
TRAPPC13-209ENST00000508304 NTRK3Q16288 839 aa7.03□□□□□ -1.28
TRAPPC13-209ENST00000508304 ZNF575Q86XF7 245 aa7.03□□□□□ -1.28
TRAPPC13-209ENST00000508304 ACRV1P26436 265 aa7.02□□□□□ -1.29
TRAPPC13-209ENST00000508304 RRADP55042 308 aa7.02□□□□□ -1.29
TRAPPC13-209ENST00000508304 GPR85P60893 370 aa7.02□□□□□ -1.29
TRAPPC13-209ENST00000508304 NFYCQ13952 458 aa7.02□□□□□ -1.29
TRAPPC13-209ENST00000508304 DPP8Q6V1X1 898 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-209ENST00000508304 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.02□□□□□ -1.29
TRAPPC13-209ENST00000508304 SH3RF2Q8TEC5 729 aa7.02□□□□□ -1.29
TRAPPC13-209ENST00000508304 SCYL1Q96KG9 808 aa7.02□□□□□ -1.29
TRAPPC13-209ENST00000508304 OR14A2Q96R54 314 aa7.02□□□□□ -1.29
TRAPPC13-209ENST00000508304 PLA2G12BQ9BX93 195 aa7.02□□□□□ -1.29
TRAPPC13-209ENST00000508304 KIAA1522Q9P206 1035 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-209ENST00000508304 SOD2P04179 222 aa7.01□□□□□ -1.29
TRAPPC13-209ENST00000508304 INHBCP55103 352 aa7.01□□□□□ -1.29
TRAPPC13-209ENST00000508304 HSP90AA2PQ14568 343 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC13-209ENST00000508304 STYK1Q6J9G0 422 aa7.01□□□□□ -1.29
TRAPPC13-209ENST00000508304 SGSM3Q96HU1 749 aa7.01□□□□□ -1.29
TRAPPC13-209ENST00000508304 CD244Q9BZW8 370 aa7.01□□□□□ -1.29
TRAPPC13-209ENST00000508304 NR2E1Q9Y466 385 aa7.01□□□□□ -1.29
TRAPPC13-209ENST00000508304 FAM47E-STBD1D6RA91 191 aa7□□□□□ -1.29
TRAPPC13-209ENST00000508304 U2SURPO15042 1029 aaKnown RBP7□□□□□ -1.29
TRAPPC13-209ENST00000508304 TBR1Q16650 682 aa7□□□□□ -1.29
TRAPPC13-209ENST00000508304 FNDC7Q5VTL7 733 aa7□□□□□ -1.29
TRAPPC13-209ENST00000508304 VPS37DQ86XT2 251 aa7□□□□□ -1.29
TRAPPC13-209ENST00000508304 IFNL3Q8IZI9 196 aa7□□□□□ -1.29
TRAPPC13-209ENST00000508304 ZNF808Q8N4W9 903 aaPredicted RBP7□□□□□ -1.29
TRAPPC13-209ENST00000508304 NEU4Q8WWR8 484 aaPredicted RBP7□□□□□ -1.29
TRAPPC13-209ENST00000508304 CFHR4Q92496 578 aa7□□□□□ -1.29
TRAPPC13-209ENST00000508304 PLEKHG4BQ96PX9 1271 aa7□□□□□ -1.29
TRAPPC13-209ENST00000508304 AARSD1Q9BTE6 412 aaKnown RBP7□□□□□ -1.29
TRAPPC13-209ENST00000508304 ZDHHC5Q9C0B5 715 aa7□□□□□ -1.29
TRAPPC13-209ENST00000508304 MSL2Q9HCI7 577 aa7□□□□□ -1.29
TRAPPC13-209ENST00000508304 A0A087X1B8 175 aa6.99□□□□□ -1.29
TRAPPC13-209ENST00000508304 TCRBV5S4A2TA0A5A2 114 aa6.99□□□□□ -1.29
TRAPPC13-209ENST00000508304 ARHGAP6O43182 974 aa6.99□□□□□ -1.29
TRAPPC13-209ENST00000508304 FGFR1P11362 822 aa6.99□□□□□ -1.29
TRAPPC13-209ENST00000508304 RPS19P39019 145 aaKnown RBP6.99□□□□□ -1.29
TRAPPC13-209ENST00000508304 OSBP2Q969R2 916 aa6.99□□□□□ -1.29
TRAPPC13-209ENST00000508304 IPPKQ9H8X2 491 aa6.99□□□□□ -1.29
TRAPPC13-209ENST00000508304 ZNF408Q9H9D4 720 aa6.99□□□□□ -1.29
TRAPPC13-209ENST00000508304 PRODHO43272 600 aa6.98□□□□□ -1.29
TRAPPC13-209ENST00000508304 RANGAP1P46060 587 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC13-209ENST00000508304 FOXL1Q12952 345 aa6.98□□□□□ -1.29
TRAPPC13-209ENST00000508304 LDLRAD3Q86YD5 345 aa6.98□□□□□ -1.29
TRAPPC13-209ENST00000508304 ARHGEF4Q9NR80 690 aa6.98□□□□□ -1.29
TRAPPC13-209ENST00000508304 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 PABPC1P11940 636 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 PTPN1P18031 435 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 NANOS3P60323 173 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 TUBA3CQ13748 450 aa6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 KRTAP15-1Q3LI76 137 aa6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 WDR72Q3MJ13 1102 aa6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 BTBD8Q5XKL5 378 aa6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 TUBA3EQ6PEY2 450 aa6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 LARP4Q71RC2 724 aaKnown RBP eCLIP6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 CELF2-AS1Q8N7Q2 184 aa6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 C12orf65Q9H3J6 166 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 ZNF703Q9H7S9 590 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 PUF60Q9UHX1 559 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-209ENST00000508304 BLACEA4D250 179 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms