RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 STRIP1Q5VSL9 837 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 TMEM179Q6ZVK1 233 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 SFR1Q86XK3 245 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 SYT2Q8N9I0 419 aaPredicted RBP12.03□□□□□ -0.48
LIN54-207ENST00000508171 NOX5Q96PH1 765 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 PACSIN1Q9BY11 444 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 VIPAS39Q9H9C1 493 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 HYOU1Q9Y4L1 999 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 PITPNM2Q9BZ72 1349 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 A0A1W2PRG0 241 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 SPDYE3A6NKU9 549 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 SFI1A8K8P3 1242 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 CETN3O15182 167 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 MSH4O15457 936 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 GH2P01242 217 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 MYBP10242 640 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 TCP1P17987 556 aaKnown RBP12.03□□□□□ -0.48
LIN54-207ENST00000508171 POLD1P28340 1107 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 KCNA1Q09470 495 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 ZSCAN26Q16670 478 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 Q4G0T1 1027 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 HAUS3Q68CZ6 603 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 SYN2Q92777 582 aaPredicted RBP12.03□□□□□ -0.48
LIN54-207ENST00000508171 RGL1Q9NZL6 768 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 EML1O00423 815 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 RNF40O75150 1001 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 CAPN2P17655 700 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 GGCXP38435 758 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 EPS15P42566 896 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 EDRF1Q3B7T1 1238 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 CCDC181Q5TID7 509 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 SYDE2Q5VT97 1194 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 IQCEQ6IPM2 695 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 MOXD1Q6UVY6 613 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 ZNF572Q7Z3I7 529 aaPredicted RBP12.02□□□□□ -0.49
LIN54-207ENST00000508171 DNAAF5Q86Y56 855 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 ZC3H3Q8IXZ2 948 aaKnown RBP12.02□□□□□ -0.49
LIN54-207ENST00000508171 MRIQ9BWK5 157 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 GANQ9H2C0 597 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 BHMT2Q9H2M3 363 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 IKZF4Q9H2S9 585 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 FAM204AQ9H8W3 233 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 MED4Q9NPJ6 270 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 PACSIN2Q9UNF0 486 aaPredicted RBP12.02□□□□□ -0.49
LIN54-207ENST00000508171 SLX4Q8IY92 1834 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 AGPSO00116 658 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 PALMO75781 387 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 FTCDO95954 541 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 SREBF1P36956 1147 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 AARSP49588 968 aaKnown RBP eCLIP12.02□□□□□ -0.49
LIN54-207ENST00000508171 KLHL30Q0D2K2 578 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 SLC18A3Q16572 532 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 KNOP1Q1ED39 458 aaKnown RBP12.02□□□□□ -0.49
LIN54-207ENST00000508171 KIAA0753Q2KHM9 967 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 DPY19L2P1Q6NXN4 242 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 RNF10Q8N5U6 811 aaKnown RBP12.02□□□□□ -0.49
LIN54-207ENST00000508171 PRMT6Q96LA8 375 aaPredicted RBP12.02□□□□□ -0.49
LIN54-207ENST00000508171 TRERF1Q96PN7 1200 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 NUCKS1Q9H1E3 243 aaKnown RBP12.02□□□□□ -0.49
LIN54-207ENST00000508171 ACBD3Q9H3P7 528 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 RBM12Q9NTZ6 932 aaKnown RBP12.02□□□□□ -0.49
LIN54-207ENST00000508171 HDAC9Q9UKV0 1011 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 FAM184BQ9ULE4 1060 aa12.02□□□□□ -0.49
LIN54-207ENST00000508171 ZBTB39O15060 712 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 BMP3P12645 472 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 NAB2Q15742 525 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 ARHGAP27Q6ZUM4 889 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 GMCL1P1Q8NEA9 526 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 AENQ8WTP8 325 aaKnown RBP12.01□□□□□ -0.49
LIN54-207ENST00000508171 ZFP91Q96JP5 570 aaPredicted RBP12.01□□□□□ -0.49
LIN54-207ENST00000508171 RUSC1Q9BVN2 902 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 PLEKHA4Q9H4M7 779 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 AIPL1Q9NZN9 384 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 VAV3Q9UKW4 847 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 TBX3O15119 743 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 AKAP3O75969 853 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 ECE1P42892 770 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 CASP4P49662 377 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 PTK2Q05397 1052 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 ITIH3Q06033 890 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 EPM2AIP1Q7L775 607 aaPredicted RBP12.01□□□□□ -0.49
LIN54-207ENST00000508171 ERMNQ8TAM6 284 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 PIGOQ8TEQ8 1089 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 GMCL1Q96IK5 515 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 ARMCX3Q9UH62 379 aaPredicted RBP12.01□□□□□ -0.49
LIN54-207ENST00000508171 TRAF3IP3Q9Y228 551 aa12.01□□□□□ -0.49
LIN54-207ENST00000508171 CLIC2O15247 247 aa12□□□□□ -0.49
LIN54-207ENST00000508171 ACTN2P35609 894 aa12□□□□□ -0.49
LIN54-207ENST00000508171 ZNF76P36508 570 aa12□□□□□ -0.49
LIN54-207ENST00000508171 PAFAH1B1P43034 410 aa12□□□□□ -0.49
LIN54-207ENST00000508171 RNASE9P60153 205 aaKnown RBP12□□□□□ -0.49
LIN54-207ENST00000508171 AOC3Q16853 763 aa12□□□□□ -0.49
LIN54-207ENST00000508171 KIAA1755Q5JYT7 1200 aa12□□□□□ -0.49
LIN54-207ENST00000508171 CCDC70Q6NSX1 233 aa12□□□□□ -0.49
LIN54-207ENST00000508171 PPP4R3CPQ6ZMV5 832 aa12□□□□□ -0.49
LIN54-207ENST00000508171 IRF2BP2Q7Z5L9 587 aa12□□□□□ -0.49
LIN54-207ENST00000508171 FAM20AQ96MK3 541 aa12□□□□□ -0.49
LIN54-207ENST00000508171 EIF2AK1Q9BQI3 630 aaKnown RBP12□□□□□ -0.49
LIN54-207ENST00000508171 PRR12Q9ULL5 1215 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms