RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 KCTD17Q8N5Z5 321 aa22.54■■□□□ 1.2
USP53-203ENST00000507597 IGSF22Q8N9C0 903 aa22.54■■□□□ 1.2
USP53-203ENST00000507597 GJA10Q969M2 543 aa22.54■■□□□ 1.2
USP53-203ENST00000507597 FAM167AQ96KS9 214 aa22.54■■□□□ 1.2
USP53-203ENST00000507597 TUT1Q9H6E5 874 aaKnown RBP22.54■■□□□ 1.2
USP53-203ENST00000507597 STARD7Q9NQZ5 370 aa22.54■■□□□ 1.2
USP53-203ENST00000507597 NRBP2Q9NSY0 501 aa22.54■■□□□ 1.2
USP53-203ENST00000507597 IGKV6D-21A0A0A0MT36 114 aa22.53■■□□□ 1.2
USP53-203ENST00000507597 MYADML2A6NDP7 307 aa22.53■■□□□ 1.2
USP53-203ENST00000507597 MARCKSP29966 332 aaPredicted RBP22.53■■□□□ 1.2
USP53-203ENST00000507597 UBA7P41226 1012 aa22.53■■□□□ 1.2
USP53-203ENST00000507597 QARSP47897 775 aaKnown RBP22.53■■□□□ 1.2
USP53-203ENST00000507597 ME1P48163 572 aa22.53■■□□□ 1.2
USP53-203ENST00000507597 ZSWIM4Q9H7M6 989 aa22.53■■□□□ 1.2
USP53-203ENST00000507597 TUFT1Q9NNX1 390 aa22.53■■□□□ 1.2
USP53-203ENST00000507597 GABBR1Q9UBS5 961 aa22.53■■□□□ 1.2
USP53-203ENST00000507597 CUTAO60888 179 aa22.52■■□□□ 1.2
USP53-203ENST00000507597 F2P00734 622 aa22.52■■□□□ 1.2
USP53-203ENST00000507597 GNAT1P11488 350 aa22.52■■□□□ 1.2
USP53-203ENST00000507597 SPIRE1Q08AE8 756 aa22.52■■□□□ 1.2
USP53-203ENST00000507597 CXCL17Q6UXB2 119 aa22.52■■□□□ 1.2
USP53-203ENST00000507597 OTUD6AQ7L8S5 288 aa22.52■■□□□ 1.2
USP53-203ENST00000507597 CDK5RAP3Q96JB5 506 aa22.52■■□□□ 1.2
USP53-203ENST00000507597 EIF2AK1Q9BQI3 630 aaKnown RBP22.52■■□□□ 1.2
USP53-203ENST00000507597 POLR3CQ9BUI4 534 aaPredicted RBP22.52■■□□□ 1.2
USP53-203ENST00000507597 FTOQ9C0B1 505 aaKnown RBP eCLIP22.52■■□□□ 1.2
USP53-203ENST00000507597 C11orf49Q9H6J7 331 aa22.52■■□□□ 1.2
USP53-203ENST00000507597 MAFBQ9Y5Q3 323 aaPredicted RBP22.52■■□□□ 1.2
USP53-203ENST00000507597 KDM3AQ9Y4C1 1321 aa22.52■■□□□ 1.2
USP53-203ENST00000507597 A0A0U1RQG5 324 aaPredicted RBP22.51■■□□□ 1.19
USP53-203ENST00000507597 A0A1W2PQ45 241 aaPredicted RBP22.51■■□□□ 1.19
USP53-203ENST00000507597 A0A1W2PQY0 241 aa22.51■■□□□ 1.19
USP53-203ENST00000507597 POTEMA6NI47 508 aa22.51■■□□□ 1.19
USP53-203ENST00000507597 PTGS1P23219 599 aa22.51■■□□□ 1.19
USP53-203ENST00000507597 RPA1P27694 616 aa22.51■■□□□ 1.19
USP53-203ENST00000507597 PSEN2P49810 448 aa22.51■■□□□ 1.19
USP53-203ENST00000507597 PTPN11Q06124 597 aaPredicted RBP22.51■■□□□ 1.19
USP53-203ENST00000507597 MFSD10Q14728 455 aa22.51■■□□□ 1.19
USP53-203ENST00000507597 ZNF579Q8NAF0 562 aaKnown RBP22.51■■□□□ 1.19
USP53-203ENST00000507597 CALML4Q96GE6 196 aa22.51■■□□□ 1.19
USP53-203ENST00000507597 C16orf70Q9BSU1 422 aa22.51■■□□□ 1.19
USP53-203ENST00000507597 SENP6Q9GZR1 1112 aaPredicted RBP22.51■■□□□ 1.19
USP53-203ENST00000507597 NT5C3AQ9H0P0 336 aa22.51■■□□□ 1.19
USP53-203ENST00000507597 CCDC39Q9UFE4 941 aa22.51■■□□□ 1.19
USP53-203ENST00000507597 POTEFA5A3E0 1075 aa22.5■■□□□ 1.19
USP53-203ENST00000507597 GOLGA6L4A6NEF3 574 aa22.5■■□□□ 1.19
USP53-203ENST00000507597 EML1O00423 815 aa22.5■■□□□ 1.19
USP53-203ENST00000507597 HBP1O60381 514 aa22.5■■□□□ 1.19
USP53-203ENST00000507597 CCT6AP40227 531 aaKnown RBP22.5■■□□□ 1.19
USP53-203ENST00000507597 CCDC60Q8IWA6 550 aaPredicted RBP22.5■■□□□ 1.19
USP53-203ENST00000507597 C4orf19Q8IY42 314 aa22.5■■□□□ 1.19
USP53-203ENST00000507597 EXOC8Q8IYI6 725 aa22.5■■□□□ 1.19
USP53-203ENST00000507597 C7orf31Q8N865 590 aa22.5■■□□□ 1.19
USP53-203ENST00000507597 RASSF8Q8NHQ8 419 aa22.5■■□□□ 1.19
USP53-203ENST00000507597 SNX29Q8TEQ0 813 aa22.5■■□□□ 1.19
USP53-203ENST00000507597 LEO1Q8WVC0 666 aaPredicted RBP22.5■■□□□ 1.19
USP53-203ENST00000507597 BBXQ8WY36 941 aaPredicted RBP22.5■■□□□ 1.19
USP53-203ENST00000507597 FBXO2Q9UK22 296 aaPredicted RBP22.5■■□□□ 1.19
USP53-203ENST00000507597 MROH7Q68CQ1 1323 aa22.5■■□□□ 1.19
USP53-203ENST00000507597 ZNF286BP0CG31 522 aa22.49■■□□□ 1.19
USP53-203ENST00000507597 EN2P19622 333 aaPredicted RBP22.49■■□□□ 1.19
USP53-203ENST00000507597 KIAA0753Q2KHM9 967 aa22.49■■□□□ 1.19
USP53-203ENST00000507597 XKR3Q5GH77 459 aa22.49■■□□□ 1.19
USP53-203ENST00000507597 NFRKBQ6P4R8 1299 aa22.49■■□□□ 1.19
USP53-203ENST00000507597 TPH2Q8IWU9 490 aa22.49■■□□□ 1.19
USP53-203ENST00000507597 DYDC2Q96IM9 177 aa22.49■■□□□ 1.19
USP53-203ENST00000507597 CCDC43Q96MW1 224 aaKnown RBP22.49■■□□□ 1.19
USP53-203ENST00000507597 GBP4Q96PP9 640 aa22.49■■□□□ 1.19
USP53-203ENST00000507597 TRPC6Q9Y210 931 aa22.49■■□□□ 1.19
USP53-203ENST00000507597 PPME1Q9Y570 386 aa22.49■■□□□ 1.19
USP53-203ENST00000507597 HTTP42858 3142 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 POTEB3A0JP26 581 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 RRN3P2A6NIE6 340 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 XRCC6P12956 609 aaKnown RBP eCLIP22.48■■□□□ 1.19
USP53-203ENST00000507597 CHMP4BP1P59074 171 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 IRX5P78411 483 aaPredicted RBP22.48■■□□□ 1.19
USP53-203ENST00000507597 ITGA7Q13683 1181 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 POTEBQ6S5H4 581 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 CABP7Q86V35 215 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 ATP8B4Q8TF62 1192 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 PAWRQ96IZ0 340 aaKnown RBP22.48■■□□□ 1.19
USP53-203ENST00000507597 NACC1Q96RE7 527 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 HSD17B14Q9BPX1 270 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 PYM1Q9BRP8 204 aaKnown RBP22.48■■□□□ 1.19
USP53-203ENST00000507597 LXNQ9BS40 222 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 CSRNP2Q9H175 543 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 FAM13BQ9NYF5 915 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 IGSF9BQ9UPX0 1349 aa22.48■■□□□ 1.19
USP53-203ENST00000507597 HAS3O00219 553 aa22.47■■□□□ 1.19
USP53-203ENST00000507597 SLITRK3O94933 977 aa22.47■■□□□ 1.19
USP53-203ENST00000507597 LYPLA2O95372 231 aa22.47■■□□□ 1.19
USP53-203ENST00000507597 OATP04181 439 aa22.47■■□□□ 1.19
USP53-203ENST00000507597 IL17AQ16552 155 aa22.47■■□□□ 1.19
USP53-203ENST00000507597 ZNF484Q5JVG2 852 aa22.47■■□□□ 1.19
USP53-203ENST00000507597 BANK1Q8NDB2 785 aa22.47■■□□□ 1.19
USP53-203ENST00000507597 KAT2BQ92831 832 aa22.47■■□□□ 1.19
USP53-203ENST00000507597 PCYT2Q99447 389 aa22.47■■□□□ 1.19
USP53-203ENST00000507597 CCSER1Q9C0I3 900 aa22.47■■□□□ 1.19
USP53-203ENST00000507597 NRCAMQ92823 1304 aa22.47■■□□□ 1.19
USP53-203ENST00000507597 FRMPD3Q5JV73 1810 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms