RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 LOXHD1Q8IVV2 1947 aa15.92■□□□□ 0.14
RNF4-208ENST00000507247 SYNRGQ9UMZ2 1314 aa15.92■□□□□ 0.14
RNF4-208ENST00000507247 ARID2Q68CP9 1835 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 IGKV6D-21A0A0A0MT36 114 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 MYADML2A6NDP7 307 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 SLITRK3O94933 977 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 RPA1P27694 616 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 TXLNAP40222 546 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 MTFR1Q15390 333 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 ZRSR1Q15695 479 aaKnown RBP15.91■□□□□ 0.14
RNF4-208ENST00000507247 TMEM119Q4V9L6 283 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 MIS18BP1Q6P0N0 1132 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 POTEGQ6S5H5 508 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 PDILTQ8N807 584 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 ENGASEQ8NFI3 743 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 LXNQ9BS40 222 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 UNC93B1Q9H1C4 597 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 UPF3AQ9H1J1 476 aaKnown RBP15.91■□□□□ 0.14
RNF4-208ENST00000507247 TUFT1Q9NNX1 390 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 GABBR1Q9UBS5 961 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 KCNH3Q9ULD8 1083 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 IGSF9BQ9UPX0 1349 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 KDM3AQ9Y4C1 1321 aa15.91■□□□□ 0.14
RNF4-208ENST00000507247 NR1I2O75469 434 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 LGR5O75473 907 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 P4HBP07237 508 aaKnown RBP15.9■□□□□ 0.14
RNF4-208ENST00000507247 RARBP10826 455 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 HOXD8P13378 290 aaPredicted RBP15.9■□□□□ 0.14
RNF4-208ENST00000507247 PLCG1P19174 1290 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 GJA9P57773 515 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 BEX3Q00994 111 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 SNW1Q13573 536 aaKnown RBP15.9■□□□□ 0.14
RNF4-208ENST00000507247 E2F4Q16254 413 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 PKN2Q16513 984 aaKnown RBP15.9■□□□□ 0.14
RNF4-208ENST00000507247 UTP14CQ5TAP6 766 aaKnown RBP15.9■□□□□ 0.14
RNF4-208ENST00000507247 SWSAP1Q6NVH7 229 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 CCDC73Q6ZRK6 1079 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 KCNK18Q7Z418 384 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 TRIM50Q86XT4 487 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 TPH2Q8IWU9 490 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 FMR1NBQ8N0W7 255 aaPredicted RBP15.9■□□□□ 0.14
RNF4-208ENST00000507247 NEK9Q8TD19 979 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 CALML4Q96GE6 196 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.9■□□□□ 0.14
RNF4-208ENST00000507247 AP5M1Q9H0R1 490 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 STK24Q9Y6E0 443 aa15.9■□□□□ 0.14
RNF4-208ENST00000507247 A0A087WWV3 80 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 A6NJR5 290 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 BACH1O14867 736 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 POLR2DO15514 142 aaKnown RBP15.89■□□□□ 0.13
RNF4-208ENST00000507247 SLC26A4O43511 780 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 ZNF862O60290 1169 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 ADAMTS4O75173 837 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 PGK1P00558 417 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 MYCP01106 439 aaPredicted RBP15.89■□□□□ 0.13
RNF4-208ENST00000507247 LGALS2P05162 132 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 SYKP43405 635 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 QARSP47897 775 aaKnown RBP15.89■□□□□ 0.13
RNF4-208ENST00000507247 SOX10P56693 466 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 NKX3-2P78367 333 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 FAM160A1Q05DH4 1040 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 NAALADL2Q58DX5 795 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 LHX8Q68G74 356 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 RASSF8Q8NHQ8 419 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 DHX58Q96C10 678 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 ZNF302Q9NR11 478 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 BLOC1S4Q9NUP1 217 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 DDX19AQ9NUU7 478 aaKnown RBP15.89■□□□□ 0.13
RNF4-208ENST00000507247 CCDC39Q9UFE4 941 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 KIAA1024Q9UPX6 916 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 MAFBQ9Y5Q3 323 aaPredicted RBP15.89■□□□□ 0.13
RNF4-208ENST00000507247 EMSYQ7Z589 1322 aa15.89■□□□□ 0.13
RNF4-208ENST00000507247 E9PMD0 336 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 ZBTB39O15060 712 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 ZNF202O95125 648 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 STBD1O95210 358 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 C6orf222P0C671 652 aaPredicted RBP15.88■□□□□ 0.13
RNF4-208ENST00000507247 ZNF286BP0CG31 522 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 CCL5P13501 91 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 ATP4AP20648 1035 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 MUTP22033 750 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 PSMC5P62195 406 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 PSMC6P62333 389 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 FSCN1Q16658 493 aaKnown RBP15.88■□□□□ 0.13
RNF4-208ENST00000507247 RRAGBQ5VZM2 374 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 AFAP1L1Q8TED9 768 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 ARMC5Q96C12 935 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 CDK5RAP3Q96JB5 506 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 ZNF333Q96JL9 665 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 C16orf70Q9BSU1 422 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 NT5C3AQ9H0P0 336 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 ZSWIM4Q9H7M6 989 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 XPNPEP3Q9NQH7 507 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 PAK6Q9NQU5 681 aaPredicted RBP15.88■□□□□ 0.13
RNF4-208ENST00000507247 SERTAD1Q9UHV2 236 aa15.88■□□□□ 0.13
RNF4-208ENST00000507247 ACTN4O43707 911 aaKnown RBP15.87■□□□□ 0.13
RNF4-208ENST00000507247 MSCO60682 206 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 PPFIA4O75335 1185 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 LYPLA2O95372 231 aa15.87■□□□□ 0.13
RNF4-208ENST00000507247 PTMSP20962 102 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms