RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 ABHD15Q6UXT9 468 aa21.84■■□□□ 1.09
LMNA-221ENST00000506981 AFAP1L1Q8TED9 768 aa21.84■■□□□ 1.09
LMNA-221ENST00000506981 PCYT2Q99447 389 aa21.84■■□□□ 1.09
LMNA-221ENST00000506981 ZNF302Q9NR11 478 aa21.84■■□□□ 1.09
LMNA-221ENST00000506981 SETD4Q9NVD3 440 aa21.84■■□□□ 1.09
LMNA-221ENST00000506981 SMC3Q9UQE7 1217 aa21.84■■□□□ 1.09
LMNA-221ENST00000506981 PCDHA10Q9Y5I2 948 aa21.84■■□□□ 1.09
LMNA-221ENST00000506981 FAM205CA6NFA0 338 aa21.83■■□□□ 1.09
LMNA-221ENST00000506981 CHMP2AO43633 222 aa21.83■■□□□ 1.09
LMNA-221ENST00000506981 SLC37A4O43826 429 aa21.83■■□□□ 1.09
LMNA-221ENST00000506981 SFNP31947 248 aa21.83■■□□□ 1.09
LMNA-221ENST00000506981 JAK3P52333 1124 aa21.83■■□□□ 1.09
LMNA-221ENST00000506981 ZNF200P98182 395 aaPredicted RBP21.83■■□□□ 1.09
LMNA-221ENST00000506981 EARS2Q5JPH6 523 aaKnown RBP21.83■■□□□ 1.09
LMNA-221ENST00000506981 PDXDC2PQ6P474 469 aa21.83■■□□□ 1.09
LMNA-221ENST00000506981 PSRC1Q6PGN9 363 aaPredicted RBP21.83■■□□□ 1.09
LMNA-221ENST00000506981 RPUSD2Q8IZ73 545 aaKnown RBP21.83■■□□□ 1.09
LMNA-221ENST00000506981 LMBR1Q8WVP7 490 aa21.83■■□□□ 1.09
LMNA-221ENST00000506981 WNT8AQ9H1J5 351 aa21.83■■□□□ 1.09
LMNA-221ENST00000506981 FOXP1Q9H334 677 aaPredicted RBP21.83■■□□□ 1.09
LMNA-221ENST00000506981 IL23AQ9NPF7 189 aa21.83■■□□□ 1.09
LMNA-221ENST00000506981 LOXHD1Q8IVV2 1947 aa21.82■■□□□ 1.08
LMNA-221ENST00000506981 BAG4O95429 457 aaKnown RBP21.82■■□□□ 1.08
LMNA-221ENST00000506981 GJB2P29033 226 aa21.82■■□□□ 1.08
LMNA-221ENST00000506981 HOXC8P31273 242 aa21.82■■□□□ 1.08
LMNA-221ENST00000506981 RFC2P35250 354 aa21.82■■□□□ 1.08
LMNA-221ENST00000506981 SWSAP1Q6NVH7 229 aa21.82■■□□□ 1.08
LMNA-221ENST00000506981 SERINC5Q86VE9 423 aa21.82■■□□□ 1.08
LMNA-221ENST00000506981 CCDC60Q8IWA6 550 aaPredicted RBP21.82■■□□□ 1.08
LMNA-221ENST00000506981 CKAP2LQ8IYA6 745 aa21.82■■□□□ 1.08
LMNA-221ENST00000506981 ETNPPLQ8TBG4 499 aa21.82■■□□□ 1.08
LMNA-221ENST00000506981 SCLYQ96I15 445 aa21.82■■□□□ 1.08
LMNA-221ENST00000506981 FAM20AQ96MK3 541 aa21.82■■□□□ 1.08
LMNA-221ENST00000506981 DISC1Q9NRI5 854 aa21.82■■□□□ 1.08
LMNA-221ENST00000506981 IGKV6D-21A0A0A0MT36 114 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 POTEB3A0JP26 581 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 RRN3P2A6NIE6 340 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 TBX3O15119 743 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 TREHO43280 583 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 PSMD10O75832 226 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 PLCB4Q15147 1175 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 SHHQ15465 462 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 GRIK4Q16099 956 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 POTEBQ6S5H4 581 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 LRRC8DQ7L1W4 858 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 MIER3Q7Z3K6 550 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 TET1Q8NFU7 2136 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 RDM1Q8NG50 284 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 DHX38Q92620 1227 aaKnown RBP21.81■■□□□ 1.08
LMNA-221ENST00000506981 RNPC3Q96LT9 517 aaKnown RBP21.81■■□□□ 1.08
LMNA-221ENST00000506981 CTAGE1Q96RT6 745 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 UNC45AQ9H3U1 944 aa21.81■■□□□ 1.08
LMNA-221ENST00000506981 H3BQV1 296 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 PARNO95453 639 aaKnown RBP21.8■■□□□ 1.08
LMNA-221ENST00000506981 PFKMP08237 780 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 IQCF3P0C7M6 154 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 CKBP12277 381 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 SELPP16109 830 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 EPHB4P54760 987 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 IGBP1P78318 339 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 RBL2Q08999 1139 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 HIC1Q14526 733 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 POTEDQ86YR6 584 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 GJA10Q969M2 543 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 MTIF3Q9H2K0 278 aaKnown RBP21.8■■□□□ 1.08
LMNA-221ENST00000506981 GABBR1Q9UBS5 961 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 TUBE1Q9UJT0 475 aa21.8■■□□□ 1.08
LMNA-221ENST00000506981 NOL7Q9UMY1 257 aaKnown RBP21.8■■□□□ 1.08
LMNA-221ENST00000506981 HBP1O60381 514 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 ACRP10323 421 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 INSRRP14616 1297 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 THPOP40225 353 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 C9orf50Q5SZB4 431 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 TAF2Q6P1X5 1199 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 DEFB128Q7Z7B8 93 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 NOSTRINQ8IVI9 506 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 SLFN12Q8IYM2 578 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 ATP8B4Q8TF62 1192 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 FAM167AQ96KS9 214 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.79■■□□□ 1.089e-7■□□□□ 10.7
LMNA-221ENST00000506981 KCNMB3Q9NPA1 279 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 IGSF9BQ9UPX0 1349 aa21.79■■□□□ 1.08
LMNA-221ENST00000506981 SIP14410 1827 aa21.78■■□□□ 1.08
LMNA-221ENST00000506981 COL1A2P08123 1366 aa21.78■■□□□ 1.08
LMNA-221ENST00000506981 NEMFO60524 1076 aa21.78■■□□□ 1.08
LMNA-221ENST00000506981 CAND2O75155 1236 aa21.78■■□□□ 1.08
LMNA-221ENST00000506981 ATP2B1P20020 1258 aa21.78■■□□□ 1.08
LMNA-221ENST00000506981 CALCRLQ16602 461 aa21.78■■□□□ 1.08
LMNA-221ENST00000506981 MCTP1Q6DN14 999 aa21.78■■□□□ 1.08
LMNA-221ENST00000506981 RSPH3Q86UC2 560 aa21.78■■□□□ 1.08
LMNA-221ENST00000506981 MAFBQ9Y5Q3 323 aaPredicted RBP21.78■■□□□ 1.08
LMNA-221ENST00000506981 GBF1Q92538 1859 aa21.77■■□□□ 1.08
LMNA-221ENST00000506981 FGBP02675 491 aa21.77■■□□□ 1.08
LMNA-221ENST00000506981 RPLP2P05387 115 aaKnown RBP21.77■■□□□ 1.08
LMNA-221ENST00000506981 ADAM17P78536 824 aa21.77■■□□□ 1.08
LMNA-221ENST00000506981 CUL4AQ13619 759 aa21.77■■□□□ 1.08
LMNA-221ENST00000506981 TRIM71Q2Q1W2 868 aaKnown RBP21.77■■□□□ 1.08
LMNA-221ENST00000506981 LRIT3Q3SXY7 679 aa21.77■■□□□ 1.08
LMNA-221ENST00000506981 TMEM240Q5SV17 173 aa21.77■■□□□ 1.08
LMNA-221ENST00000506981 ZNF365Q70YC5 407 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms