RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 KCNA2P16389 499 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 CIITAP33076 1130 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 KRT2P35908 639 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 PSMC6P62333 389 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 SETQ01105 290 aaPredicted RBP8.25□□□□□ -1.09
GYPB-206ENST00000506516 PTPN11Q06124 597 aaPredicted RBP8.25□□□□□ -1.09
GYPB-206ENST00000506516 SEMA3FQ13275 785 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 NONOQ15233 471 aaKnown RBP eCLIP8.25□□□□□ -1.09
GYPB-206ENST00000506516 SKIV2LQ15477 1246 aaKnown RBP8.25□□□□□ -1.09
GYPB-206ENST00000506516 NFRKBQ6P4R8 1299 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 KRT25Q7Z3Z0 450 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 PLA2G4DQ86XP0 818 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 SLC43A3Q8NBI5 491 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 CYP2W1Q8TAV3 490 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 RASGRP4Q8TDF6 673 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 TBCKQ8TEA7 893 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 CRYGNQ8WXF5 182 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 SEPT1Q8WYJ6 367 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 NAP1L4Q99733 375 aaKnown RBP8.25□□□□□ -1.09
GYPB-206ENST00000506516 AGO4Q9HCK5 861 aaKnown RBP8.25□□□□□ -1.09
GYPB-206ENST00000506516 PRDM5Q9NQX1 630 aaPredicted RBP8.25□□□□□ -1.09
GYPB-206ENST00000506516 TBC1D22BQ9NU19 505 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 TMEM39AQ9NV64 488 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 TCEAL9Q9UHQ7 104 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.25□□□□□ -1.09
GYPB-206ENST00000506516 NFASCO94856 1347 aa8.25□□□□□ -1.09
GYPB-206ENST00000506516 DNAH12Q6ZR08 3092 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 FAM86B1E9PN63 330 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 H3BRB1 525 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 IPO5O00410 1097 aaKnown RBP8.24□□□□□ -1.09
GYPB-206ENST00000506516 ADAMTS3O15072 1205 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 DTNBO60941 627 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 MMP1P03956 469 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 FAM86B2P0C5J1 330 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 RAG1P15918 1043 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 SYN1P17600 705 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 FAAP100Q0VG06 881 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 NBPF20Q3BBV1 942 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 PRR16Q569H4 304 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 FAM47CQ5HY64 1035 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 C7orf31Q8N865 590 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 SPIRE2Q8WWL2 714 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 TNPO1Q92973 898 aaKnown RBP8.24□□□□□ -1.09
GYPB-206ENST00000506516 TMX3Q96JJ7 454 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 C8orf76Q96K31 380 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 ZFRQ96KR1 1074 aaKnown RBP8.24□□□□□ -1.09
GYPB-206ENST00000506516 GPR20Q99678 358 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 ZNF577Q9BSK1 485 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 TUT1Q9H6E5 874 aaKnown RBP8.24□□□□□ -1.09
GYPB-206ENST00000506516 BCAS3Q9H6U6 928 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 JPH1Q9HDC5 661 aaPredicted RBP8.24□□□□□ -1.09
GYPB-206ENST00000506516 GJB4Q9NTQ9 266 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 PKD2L1Q9P0L9 805 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 SLC9A2Q9UBY0 812 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 ZNF215Q9UL58 517 aaPredicted RBP8.24□□□□□ -1.09
GYPB-206ENST00000506516 ZMYND8Q9ULU4 1186 aaPredicted RBP8.24□□□□□ -1.09
GYPB-206ENST00000506516 NOD1Q9Y239 953 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 LCTP09848 1927 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 GRIN2DO15399 1336 aa8.24□□□□□ -1.09
GYPB-206ENST00000506516 IGLV3-22A0A075B6J6 115 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 CYP3A7-CYP3A51PA0A087WV96 503 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 MARCH6O60337 910 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 F2P00734 622 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 CD4P01730 458 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 LGALS2P05162 132 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 GNAT1P11488 350 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 HOXD8P13378 290 aaPredicted RBP8.23□□□□□ -1.09
GYPB-206ENST00000506516 CYP3A7P24462 503 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 TCF7P36402 384 aaPredicted RBP8.23□□□□□ -1.09
GYPB-206ENST00000506516 SP4Q02446 784 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 ST3GAL1Q11201 340 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 GNL2Q13823 731 aaKnown RBP8.23□□□□□ -1.09
GYPB-206ENST00000506516 NPY5RQ15761 445 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 INF2Q27J81 1249 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 KIAA0753Q2KHM9 967 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 LETM2Q2VYF4 491 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 Q4G0T1 1027 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 UTP14CQ5TAP6 766 aaKnown RBP8.23□□□□□ -1.09
GYPB-206ENST00000506516 KRT40Q6A162 431 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 MOXD1Q6UVY6 613 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 PIK3AP1Q6ZUJ8 805 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 SESTD1Q86VW0 696 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 FAM126BQ8IXS8 530 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 DIS3L2Q8IYB7 885 aaKnown RBP8.23□□□□□ -1.09
GYPB-206ENST00000506516 FBXO18Q8NFZ0 1043 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 KAT2BQ92831 832 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 GLG1Q92896 1179 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 SMARCAD1Q9H4L7 1026 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 AZI2Q9H6S1 392 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 SMC3Q9UQE7 1217 aa8.23□□□□□ -1.09
GYPB-206ENST00000506516 MCM3APO60318 1980 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 GSTTP1A0A1W2PQM5 241 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 BTBD18B2RXH4 712 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 HAS3O00219 553 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 KIAA0355O15063 1070 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 B4GALT4O60513 344 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 CCNT1O60563 726 aaKnown RBP8.22□□□□□ -1.09
GYPB-206ENST00000506516 RNF40O75150 1001 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 BAG4O95429 457 aaKnown RBP8.22□□□□□ -1.09
GYPB-206ENST00000506516 TIMP1P01033 207 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms