RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 LMNB1P20700 586 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 ZNF131P52739 623 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 ALCAMQ13740 583 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 C1orf186Q6ZWK4 172 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 TPH2Q8IWU9 490 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 RDM1Q8NG50 284 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 NEK11Q8NG66 645 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 WRNIP1Q96S55 665 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 EIF3CQ99613 913 aaKnown RBP19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 UNC45AQ9H3U1 944 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 PARVGQ9HBI0 331 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 TCEAL9Q9UHQ7 104 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 NPHP3-ACAD11A0A0J9YXS1 232 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 RNF225M0QZC1 329 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 VWA5AO00534 786 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 NFIBO00712 420 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 MAFGO15525 162 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 URI1O94763 535 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 P4HBP07237 508 aaKnown RBP19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 MAP3K9P80192 1104 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 SPP2Q13103 211 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 ADAM9Q13443 819 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 ANGEL2Q5VTE6 544 aaKnown RBP19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 GOLGA5Q8TBA6 731 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 TSGA10Q9BZW7 698 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 RAVER2Q9HCJ3 691 aaKnown RBP19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 RGL1Q9NZL6 768 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 RASSF10A6NK89 507 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 ARP10275 920 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 MAPTP10636 758 aaKnown RBP19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 HSP90AA2PQ14568 343 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 WDR59Q6PJI9 974 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 PDCL2Q8N4E4 241 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 GLIS3Q8NEA6 775 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 MNS1Q8NEH6 495 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 ZSWIM4Q9H7M6 989 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 AGO4Q9HCK5 861 aaKnown RBP19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 KCNH7Q9NS40 1196 aa19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 DBR1Q9UK59 544 aaKnown RBP19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 DICER1Q9UPY3 1922 aaKnown RBP19.06■□□□□ 0.64
TRAPPC11-204ENST00000505676 ITGB5P18084 799 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 CTTNQ14247 550 aaKnown RBP19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 SAMD1Q6SPF0 538 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 MIER3Q7Z3K6 550 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 RBM46Q8TBY0 533 aaKnown RBP19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 TRERF1Q96PN7 1200 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 RUSC1Q9BVN2 902 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 TBC1D7Q9P0N9 293 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 CEP72Q9P209 647 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 ADAMTS5Q9UNA0 930 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 NR2F2P24468 414 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 SFNP31947 248 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 JAK3P52333 1124 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 RNF207Q6ZRF8 634 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 NELFCDQ8IXH7 590 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 CPXCR1Q8N123 301 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 ZNF710Q8N1W2 664 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 TMOD4Q9NZQ9 345 aa19.05■□□□□ 0.64
TRAPPC11-204ENST00000505676 EFCAB8A8MWE9 144 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 KRT86O43790 486 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 STAM2O75886 525 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 DSG3P32926 999 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 MTMR1Q13613 665 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 SLC17A8Q8NDX2 589 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 KLRG1Q96E93 195 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 UIMC1Q96RL1 719 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 LXNQ9BS40 222 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 MKNK1Q9BUB5 465 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 LZTFL1Q9NQ48 299 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 AGPAT5Q9NUQ2 364 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 COL20A1Q9P218 1284 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 MRFAP1Q9Y605 127 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 CTAGE9A4FU28 777 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 ARHGEF35A5YM69 484 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 CHMP2AO43633 222 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 EPS15P42566 896 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 RPS6P62753 249 aaKnown RBP19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 CACNB1Q02641 598 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 MYBPC2Q14324 1141 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 COG2Q14746 738 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 PGM5Q15124 567 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 WDR24Q96S15 920 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 CHP1Q99653 195 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 MMRN2Q9H8L6 949 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 NHEJ1Q9H9Q4 299 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 DAAM1Q9Y4D1 1078 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 PCDHB13Q9Y5F0 798 aa19.04■□□□□ 0.64
TRAPPC11-204ENST00000505676 ASTN2O75129 1339 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 SMCHD1A6NHR9 2005 aa19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 PARP14Q460N5 1801 aa19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 SSU72P8A0A1W2PR75 194 aa19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 PPP1R12BO60237 982 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 GCNT3O95395 438 aa19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 EPB41P11171 864 aaKnown RBP19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 UBXN2AP68543 259 aa19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 RBM10P98175 930 aaKnown RBP19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 KRT76Q01546 638 aa19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 ACRBPQ8NEB7 543 aa19.03■□□□□ 0.64
TRAPPC11-204ENST00000505676 GPRASP2Q96D09 838 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms