RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SVIPQ8NHG7 77 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 CHTF18Q8WVB6 975 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 FBXW5Q969U6 566 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 DACT3Q96B18 629 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 SPTLC3Q9NUV7 552 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 OBP2AQ9NY56 170 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 RCAN3Q9UKA8 241 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 YBX2Q9Y2T7 364 aaKnown RBP4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 COQ6Q9Y2Z9 468 aa4.99□□□□□ -1.61
TRAPPC13-208ENST00000505553 PTPDC1A2A3K4 754 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 FITM1A5D6W6 292 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 VSTM5A8MXK1 200 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 FAM47E-STBD1D6RA91 191 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 PRPF3O43395 683 aaKnown RBP4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 PLS3P13797 630 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 ATP2A2P16615 1042 aaKnown RBP4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 MECP2P51608 486 aaKnown RBP4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 TCIRG1Q13488 830 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 GTF2H3Q13889 308 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 TMEM240Q5SV17 173 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 C16orf59Q7L2K0 433 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 FRMD5Q7Z6J6 570 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 SPPL2CQ8IUH8 684 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 CPA6Q8N4T0 437 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 EFHBQ8N7U6 833 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 C2orf69Q8N8R5 385 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 SLC5A5Q92911 643 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 SLC39A13Q96H72 371 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 FCRL3Q96P31 734 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 MCMBPQ9BTE3 642 aa4.98□□□□□ -1.61
TRAPPC13-208ENST00000505553 CCDC66A2RUB6 948 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 ERC2O15083 957 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 MYO1BO43795 1136 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 MT-CO1P00395 513 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 SOD2P04179 222 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 NBPF7P0C2Y1 421 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 PF4V1P10720 104 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 RBP3P10745 1247 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 TRIM27P14373 513 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 PAMP19021 973 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 IARSP41252 1262 aaKnown RBP4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 CTSKP43235 329 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 DNM2P50570 870 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 NR0B2Q15466 257 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 ZRSR2Q15696 482 aaKnown RBP4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 CRY1Q16526 586 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 DDB1Q16531 1140 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 PGM2L1Q6PCE3 622 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 CRTC3Q6UUV7 619 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 OVCH1Q7RTY7 1134 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 TPH2Q8IWU9 490 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 C1orf162Q8NEQ5 155 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 CLIP3Q96DZ5 547 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 FAXDC2Q96IV6 333 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 MMP19Q99542 508 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 BDH2Q9BUT1 245 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 HDAC8Q9BY41 377 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 C19orf44Q9H6X5 657 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 CLEC1BQ9P126 229 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 TMEFF2Q9UIK5 374 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 CNOT11Q9UKZ1 510 aaKnown RBP4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 PCDHA11Q9Y5I1 949 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 NPHP3-ACAD11A0A0J9YXS1 232 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 IFRD1O00458 451 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 MSCO60682 206 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 ZGLP1P0C6A0 271 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 IFNGR1P15260 489 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 VAV1P15498 845 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 ENDOUP21128 410 aaKnown RBP4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 GTF2A2P52657 109 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 ZXDAP98168 799 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 PICALMQ13492 652 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 SNX17Q15036 470 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 C4orf46Q504U0 113 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 CCDC103Q8IW40 242 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 AMOTL1Q8IY63 956 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 CLRN3Q8NCR9 226 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 RCBTB1Q8NDN9 531 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 IL17RAQ96F46 866 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 TCTN2Q96GX1 697 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 NUP88Q99567 741 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 SARGQ9BW04 601 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 SLC12A9Q9BXP2 914 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 SP110Q9HB58 689 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 CHST12Q9NRB3 414 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 CATSPERZQ9NTU4 200 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 OXSMQ9NWU1 459 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 MKS1Q9NXB0 559 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 MINPP1Q9UNW1 487 aa4.97□□□□□ -1.61
TRAPPC13-208ENST00000505553 SSU72P8A0A1W2PR75 194 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 H7C1D1 291 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 ARNTLO00327 626 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 LTFP02788 710 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 GSTM1P09488 218 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 IFIT2P09913 472 aaKnown RBP4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 PHKG2P15735 406 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 GRK2P25098 689 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 GRK3P35626 688 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 CHRNEQ04844 493 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 DUSP4Q13115 394 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms