RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-219ENST00000505207 PPP2R3CQ969Q6 453 aa12.72□□□□□ -0.37
UBE2D3-219ENST00000505207 PABPC5Q96DU9 382 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-219ENST00000505207 JPH1Q9HDC5 661 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-219ENST00000505207 RBM28Q9NW13 759 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-219ENST00000505207 RAPGEFL1Q9UHV5 662 aa12.72□□□□□ -0.37
UBE2D3-219ENST00000505207 SQORQ9Y6N5 450 aa12.72□□□□□ -0.37
UBE2D3-219ENST00000505207 MICAL3Q7RTP6 2002 aa12.72□□□□□ -0.37
UBE2D3-219ENST00000505207 KAT6AQ92794 2004 aa12.72□□□□□ -0.37
UBE2D3-219ENST00000505207 BRWD1Q9NSI6 2320 aa12.72□□□□□ -0.37
UBE2D3-219ENST00000505207 PTPRSQ13332 1948 aa12.72□□□□□ -0.37
UBE2D3-219ENST00000505207 C5orf67F2Z3F1 127 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 ENPP3O14638 875 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 SLC27A2O14975 620 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 STAG3L1P0CL83 205 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 SLC26A2P50443 739 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 BTG3Q14201 252 aaPredicted RBP12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 LPIN1Q14693 890 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 TCEAL5Q5H9L2 206 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 CREB3L3Q68CJ9 461 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 TMTC3Q6ZXV5 915 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 NME8Q8N427 588 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 NEK9Q8TD19 979 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 DNAJB3Q8WWF6 145 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 PLVAPQ9BX97 442 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 UPF3BQ9BZI7 483 aaKnown RBP12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 ANO2Q9NQ90 1003 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 SLC9A2Q9UBY0 812 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 PRKAG3Q9UGI9 489 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 TRPC6Q9Y210 931 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 CDY2AQ9Y6F7 541 aa12.71□□□□□ -0.37
UBE2D3-219ENST00000505207 SIP14410 1827 aa12.71□□□□□ -0.38
UBE2D3-219ENST00000505207 ADGRA3Q8IWK6 1321 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 hCG_1984214I3L0E3 225 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 NAPAP54920 295 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 IGBP1P78318 339 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 MRPS6P82932 125 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 MGAT3Q09327 533 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 UBE2SQ16763 222 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 CSPP1Q1MSJ5 1256 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 NAALADL2Q58DX5 795 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 FBXO47Q5MNV8 452 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 ODR4Q5SWX8 454 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 PPP1R18Q6NYC8 613 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 RUFY4Q6ZNE9 571 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 PLPPR4Q7Z2D5 763 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 SGMS1Q86VZ5 419 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 CMTR1Q8N1G2 835 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 ZNF713Q8N859 430 aaPredicted RBP12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 CLP1Q92989 425 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 MXRA8Q9BRK3 442 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 ESYT1Q9BSJ8 1104 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 LSG1Q9H089 658 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 KCNH7Q9NS40 1196 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 CLDND1Q9NY35 253 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 PKD2L1Q9P0L9 805 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 REV3LO60673 3130 aa12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 COL4A4P53420 1690 aaPredicted RBP12.7□□□□□ -0.38
UBE2D3-219ENST00000505207 NFASCO94856 1347 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 H3BQ06 376 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 INSRRP14616 1297 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 RXRAP19793 462 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 ZNF76P36508 570 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 STAT5BP51692 787 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 NECTIN1Q15223 517 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 MICU3Q86XE3 530 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 POP1Q99575 1024 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 OSBPL7Q9BZF2 842 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 FAM49AQ9H0Q0 323 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 RIC8AQ9NPQ8 531 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 TELO2Q9Y4R8 837 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 PCDHA2Q9Y5H9 948 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 TRPV2Q9Y5S1 764 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 COL4A6Q14031 1691 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 XIRP2A4UGR9 3374 aa12.69□□□□□ -0.38
UBE2D3-219ENST00000505207 hCG_1642624A0A1W2PR95 340 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 PRR33A8MZF0 331 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 DGKIO75912 1065 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 IL9P15248 144 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 ADCY7P51828 1080 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 ACTR2P61160 394 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 PAK2Q13177 524 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 KRT32Q14532 448 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 COL19A1Q14993 1142 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 RTN1Q16799 776 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 CEP55Q53EZ4 464 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 MARCH8Q5T0T0 291 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 FAM160B1Q5W0V3 765 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 MCTP2Q6DN12 878 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 NPAS4Q8IUM7 802 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 CMTR2Q8IYT2 770 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 P2RX5Q93086 422 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 ZNF689Q96CS4 500 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 NEK1Q96PY6 1258 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 CD320Q9NPF0 282 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 LRFN2Q9ULH4 789 aa12.68□□□□□ -0.38
UBE2D3-219ENST00000505207 CCDC196A0A1B0GTZ2 297 aa12.67□□□□□ -0.38
UBE2D3-219ENST00000505207 SMIM35A0A1B0GVV1 85 aa12.67□□□□□ -0.38
UBE2D3-219ENST00000505207 POTEB3A0JP26 581 aa12.67□□□□□ -0.38
UBE2D3-219ENST00000505207 BACH1O14867 736 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms