RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 TAOK1Q7L7X3 1001 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 CCDC97Q96F63 343 aaPredicted RBP8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 PITPNM3Q9BZ71 974 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 TFCP2L1Q9NZI6 479 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 SNX12Q9UMY4 172 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 TRPC6Q9Y210 931 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 H7C1D1 291 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 SART1O43290 800 aaKnown RBP8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 KRT5P13647 590 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 ATF3P18847 181 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 SOX11P35716 441 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 RFC5P40937 340 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 PTPN12Q05209 780 aaKnown RBP8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 IFI16Q16666 785 aaKnown RBP8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 QPCTQ16769 361 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 ALS2CLQ60I27 953 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 ERP27Q96DN0 273 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 DSCC1Q9BVC3 393 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 PRDM11Q9NQV5 511 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 PPP1R9AQ9ULJ8 1098 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 TMA7Q9Y2S6 64 aaKnown RBP8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 AFDNP55196 1824 aaKnown RBP8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 CHD4Q14839 1912 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 LRRC37AA6NMS7 1700 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 HMGB1P1B2RPK0 211 aaPredicted RBP8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 DDX39AO00148 427 aaKnown RBP8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 TBCAO75347 108 aaKnown RBP8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 SNUPNO95149 360 aaKnown RBP8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 SHBGP04278 402 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 SLC5A1P13866 664 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 CA4P22748 312 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 ITGA6P23229 1130 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 OVGP1Q12889 678 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 RASGRP2Q7LDG7 609 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 AGAP11Q8TF27 550 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 MAML1Q92585 1016 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 NMD3Q96D46 503 aaKnown RBP8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 MARCOQ9UEW3 520 aaPredicted RBP8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 AMFRQ9UKV5 643 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 SPATA31A1Q5TZJ5 1347 aa8.47□□□□□ -1.05
ATP2C1-208ENST00000504948 CREB3O43889 395 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 GAS8O95995 478 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 PDE6AP16499 860 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 ATF7P17544 494 aaPredicted RBP8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 FOXD4Q12950 439 aaPredicted RBP8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 SEL1L2Q5TEA6 688 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 ERICH1Q86X53 443 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 DCLK2Q8N568 766 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 LRRC8CQ8TDW0 803 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 ZMYND12Q9H0C1 365 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 SEC31BQ9NQW1 1179 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 BZW2Q9Y6E2 419 aaKnown RBP8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 AFF2P51816 1311 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 DICER1Q9UPY3 1922 aaKnown RBP8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 FAM107AO95990 144 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 KCNA3P22001 575 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 ATICP31939 592 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 BCAMP50895 628 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 TCIRG1Q13488 830 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 ZNF790Q6PG37 636 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 IFNL3Q8IZI9 196 aa8.46□□□□□ -1.05
ATP2C1-208ENST00000504948 UBN2Q6ZU65 1347 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 RCCD1A6NED2 376 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 CCDC169A6NNP5 214 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 DKC1O60832 514 aaKnown RBP eCLIP8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 CIB2O75838 187 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 MMP1P03956 469 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 SETSIPP0DME0 302 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 EEF1GP26641 437 aaKnown RBP8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 PSEN1P49768 467 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 ZMYM1Q5SVZ6 1142 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 AGR3Q8TD06 166 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 NEK9Q8TD19 979 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 GSDMAQ96QA5 445 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 MTRQ99707 1265 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 PACSIN1Q9BY11 444 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 SUDS3Q9H7L9 328 aaPredicted RBP8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 ABCF3Q9NUQ8 709 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 HAO1Q9UJM8 370 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 PHF8Q9UPP1 1060 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 MAGEB6P1A0A0J9YX57 407 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 RNMTO43148 476 aaKnown RBP8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 PPP6R2O75170 966 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 ACTN1P12814 892 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 PTPREP23469 700 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 ZBED6P86452 979 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 SUGP1Q8IWZ8 645 aaKnown RBP8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 C4orf33Q8N1A6 199 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 UPF1Q92900 1129 aaKnown RBP eCLIP8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 RAB34Q9BZG1 259 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 NDST4Q9H3R1 872 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 VCPKMTQ9H867 229 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 PANK4Q9NVE7 773 aa8.46□□□□□ -1.06
ATP2C1-208ENST00000504948 NEDD4P46934 1319 aa8.45□□□□□ -1.06
ATP2C1-208ENST00000504948 RASSF10A6NK89 507 aa8.45□□□□□ -1.06
ATP2C1-208ENST00000504948 ZBBXA8MT70 800 aa8.45□□□□□ -1.06
ATP2C1-208ENST00000504948 PGRMC1O00264 195 aaKnown RBP8.45□□□□□ -1.06
ATP2C1-208ENST00000504948 SORBS3O60504 671 aa8.45□□□□□ -1.06
ATP2C1-208ENST00000504948 LUC7L3O95232 432 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms