RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 USP17L6PQ6QN14 398 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 CASC1Q6TDU7 716 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 TSHZ1Q6ZSZ6 1077 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 ZNF710Q8N1W2 664 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 FIBCD1Q8N539 461 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 BCAS3Q9H6U6 928 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 PSTPIP2Q9H939 334 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 CD320Q9NPF0 282 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 TUBE1Q9UJT0 475 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 MTUS1Q9ULD2 1270 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 MYH9P35579 1960 aaKnown RBP7□□□□□ -1.29
LSM3P4-201ENST00000502948 IGKV6D-21A0A0A0MT36 114 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 SMIM35A0A1B0GVV1 85 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 SPDYE3A6NKU9 549 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 ATP9AO75110 1047 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 IL9P15248 144 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 LTBRP36941 435 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 ARHGAP4P98171 946 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 ZP2Q05996 745 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 PPFIA1Q13136 1202 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 MTMR1Q13613 665 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 LPIN1Q14693 890 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 SMAD2Q15796 467 aaKnown RBP7□□□□□ -1.29
LSM3P4-201ENST00000502948 GRIK4Q16099 956 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 TSGA10IPQ3SY00 556 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 ODR4Q5SWX8 454 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 MCTP2Q6DN12 878 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 NIPA1Q7RTP0 329 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 ADHFE1Q8IWW8 467 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 CMTR2Q8IYT2 770 aaKnown RBP7□□□□□ -1.29
LSM3P4-201ENST00000502948 SRBD1Q8N5C6 995 aaKnown RBP7□□□□□ -1.29
LSM3P4-201ENST00000502948 FANCBQ8NB91 859 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 POP1Q99575 1024 aaKnown RBP7□□□□□ -1.29
LSM3P4-201ENST00000502948 MXRA8Q9BRK3 442 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 UPF3BQ9BZI7 483 aaKnown RBP7□□□□□ -1.29
LSM3P4-201ENST00000502948 LSG1Q9H089 658 aaKnown RBP7□□□□□ -1.29
LSM3P4-201ENST00000502948 JPH1Q9HDC5 661 aaPredicted RBP7□□□□□ -1.29
LSM3P4-201ENST00000502948 RBM28Q9NW13 759 aaKnown RBP7□□□□□ -1.29
LSM3P4-201ENST00000502948 RTEL1Q9NZ71 1219 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 PCDHA2Q9Y5H9 948 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 RBM8AQ9Y5S9 174 aaKnown RBP7□□□□□ -1.29
LSM3P4-201ENST00000502948 IGSF9BQ9UPX0 1349 aa7□□□□□ -1.29
LSM3P4-201ENST00000502948 COL1A2P08123 1366 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 PLXNA4Q9HCM2 1894 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 CCDC69A6NI79 296 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 DCXO43602 365 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 PRC1O43663 620 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 EYA4O95677 639 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 CTSHP09668 335 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 STAG3L1P0CL83 205 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 MRPS6P82932 125 aaKnown RBP6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 UBE3AQ05086 875 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 AP3B2Q13367 1082 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 PKN1Q16512 942 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 TCEAL5Q5H9L2 206 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 RNF20Q5VTR2 975 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 FAM117BQ6P1L5 589 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 TMTC3Q6ZXV5 915 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 BMP8AQ7Z5Y6 402 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 TRIM50Q86XT4 487 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 NPAS4Q8IUM7 802 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 FBXL16Q8N461 479 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 RSPH1Q8WYR4 309 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 KHSRPQ92945 711 aaKnown RBP eCLIP6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 PPP2R3CQ969Q6 453 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 PCYT2Q99447 389 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 OSBPL7Q9BZF2 842 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 RIC8AQ9NPQ8 531 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 KCNH7Q9NS40 1196 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 SLC9A2Q9UBY0 812 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 PCDHA6Q9UN73 950 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 PCDHA8Q9Y5H6 950 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 SLC12A7Q9Y666 1083 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 TAF6LQ9Y6J9 622 aa6.99□□□□□ -1.29
LSM3P4-201ENST00000502948 EVPLQ92817 2033 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 ESYT2A0FGR8 921 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 M0QZ92 97 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 MEIS1O00470 390 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 UPP2O95045 317 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 PLEKHA8P1O95397 391 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 CYP3A4P08684 503 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 GHRP10912 638 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 INSRRP14616 1297 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 SREBF1P36956 1147 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 CLK2P49760 499 aaKnown RBP6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 STAT5BP51692 787 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 EXOSC10Q01780 885 aaKnown RBP6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 FUT2Q10981 343 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 COASYQ13057 564 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 ADAM15Q13444 863 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 SMAD4Q13485 552 aaKnown RBP6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 CAMK1Q14012 370 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 BTG3Q14201 252 aaPredicted RBP6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 CSPP1Q1MSJ5 1256 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 CEP55Q53EZ4 464 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 HERC4Q5GLZ8 1057 aaPredicted RBP6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 UTP14CQ5TAP6 766 aaKnown RBP6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 PDE12Q6L8Q7 609 aaKnown RBP6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 TMEM184AQ6ZMB5 413 aa6.98□□□□□ -1.29
LSM3P4-201ENST00000502948 RUFY4Q6ZNE9 571 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms