RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 TMEM199Q8N511 208 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 ETNPPLQ8TBG4 499 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 ATP6V0A1Q93050 837 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 CTAGE1Q96RT6 745 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 DISC1Q9NRI5 854 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 PCDHA10Q9Y5I2 948 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 UMODL1Q5DID0 1318 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 NRCAMQ92823 1304 aa8.25□□□□□ -1.09
USP46-203ENST00000502443 CEP290O15078 2479 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 IGKV6D-21A0A0A0MT36 114 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 POTEB3A0JP26 581 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 WDR64B1ANS9 1081 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 PITPNM1O00562 1244 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 WNT7AO00755 349 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 TBX3O15119 743 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 TREHO43280 583 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 NEMFO60524 1076 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 PSMD10O75832 226 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 BAG4O95429 457 aaKnown RBP8.24□□□□□ -1.09
USP46-203ENST00000502443 CSF2RAP15509 400 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 SFNP31947 248 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 MCM7P33993 719 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 SLC26A2P50443 739 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 IGBP1P78318 339 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 PPFIA1Q13136 1202 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 PTK7Q13308 1070 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 LARP1BQ659C4 914 aaKnown RBP8.24□□□□□ -1.09
USP46-203ENST00000502443 PDXDC2PQ6P474 469 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 POTEBQ6S5H4 581 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 TRMT1LQ7Z2T5 733 aaKnown RBP8.24□□□□□ -1.09
USP46-203ENST00000502443 MIER3Q7Z3K6 550 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 CCDC60Q8IWA6 550 aaPredicted RBP8.24□□□□□ -1.09
USP46-203ENST00000502443 SLFN12Q8IYM2 578 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 CCDC155Q8N6L0 562 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 RETREG2Q8NC44 543 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 LMBR1Q8WVP7 490 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 HAS1Q92839 578 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 TNPO1Q92973 898 aaKnown RBP8.24□□□□□ -1.09
USP46-203ENST00000502443 SNX21Q969T3 373 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 FAM20AQ96MK3 541 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 WNT8AQ9H1J5 351 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 PRO3102Q9H379 93 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 UNC45AQ9H3U1 944 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 KCNMB3Q9NPA1 279 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 ZNF302Q9NR11 478 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 TRPC6Q9Y210 931 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 WDR81Q562E7 1941 aa8.24□□□□□ -1.09
USP46-203ENST00000502443 RRN3P2A6NIE6 340 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 KIF28PB7ZC32 967 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 HBP1O60381 514 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 IQCF3P0C7M6 154 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 CKBP12277 381 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 INSRRP14616 1297 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 U2AF2P26368 475 aaKnown RBP eCLIP8.23□□□□□ -1.09
USP46-203ENST00000502443 HOXC8P31273 242 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 JAK3P52333 1124 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 EPHB4P54760 987 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 ADAM17P78536 824 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 PPIGQ13427 754 aaKnown RBP eCLIP8.23□□□□□ -1.09
USP46-203ENST00000502443 PLCB4Q15147 1175 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 GRIK4Q16099 956 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 CALCRLQ16602 461 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 SERINC5Q86VE9 423 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 HSCBQ8IWL3 235 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 TDHQ8IZJ6 230 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 RDM1Q8NG50 284 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 CAGE1Q8TC20 777 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 AFAP1L1Q8TED9 768 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 ATP8B4Q8TF62 1192 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 DHX38Q92620 1227 aaKnown RBP8.23□□□□□ -1.09
USP46-203ENST00000502443 SCLYQ96I15 445 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 FOXD4L1Q9NU39 408 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 GABBR1Q9UBS5 961 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 TUBE1Q9UJT0 475 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 NOL7Q9UMY1 257 aaKnown RBP8.23□□□□□ -1.09
USP46-203ENST00000502443 PCDHA12Q9UN75 941 aa8.23□□□□□ -1.09
USP46-203ENST00000502443 MAFBQ9Y5Q3 323 aaPredicted RBP8.23□□□□□ -1.09
USP46-203ENST00000502443 SCN5AQ14524 2016 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 A0A1W2PPC1 479 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 EML1O00423 815 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 HSP90AA1P07900 732 aaKnown RBP8.22□□□□□ -1.09
USP46-203ENST00000502443 ACRP10323 421 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 SELPP16109 830 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 ATP4AP20648 1035 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 PDCP20941 246 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 THPOP40225 353 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 TXKP42681 527 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 TRAPPC10P48553 1259 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 PPP2R5CQ13362 524 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 SHHQ15465 462 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 ZNF174Q15697 407 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 UGCGQ16739 394 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 HABP4Q5JVS0 413 aaKnown RBP8.22□□□□□ -1.09
USP46-203ENST00000502443 TTC38Q5R3I4 469 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 C9orf50Q5SZB4 431 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 ZNF618Q5T7W0 954 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 B3GNT9Q6UX72 402 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 LRRC8DQ7L1W4 858 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 DEFB128Q7Z7B8 93 aa8.22□□□□□ -1.09
USP46-203ENST00000502443 RPUSD2Q8IZ73 545 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms